RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 ZNF560Q96MR9 790 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 PKMYT1Q99640 499 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 FAM83CQ9BQN1 747 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 ACBD6Q9BR61 282 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 CBWD1Q9BRT8 395 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 PI4K2AQ9BTU6 479 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 PCIF1Q9H4Z3 704 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 PANK4Q9NVE7 773 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 RBAKQ9NYW8 714 aaPredicted RBP15.91■□□□□ 0.14
NDE1-203ENST00000570727 MTMR6Q9Y217 621 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 CCL26Q9Y258 94 aa15.91■□□□□ 0.14
NDE1-203ENST00000570727 RALGAPA1Q6GYQ0 2036 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 CHURC1-FNTBB4DL54 471 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 TULP1O00294 542 aaPredicted RBP15.9■□□□□ 0.14
NDE1-203ENST00000570727 EXTL3O43909 919 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 PRPF40AO75400 957 aaKnown RBP15.9■□□□□ 0.14
NDE1-203ENST00000570727 PRPF6O94906 941 aaKnown RBP15.9■□□□□ 0.14
NDE1-203ENST00000570727 TXLNAP40222 546 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 FNTBP49356 437 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 ITPRIPL2Q3MIP1 535 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 SDHAF4Q5VUM1 108 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 OSTM1Q86WC4 334 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 SYCP3Q8IZU3 236 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 MAB21L3Q8N8X9 362 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 RIN3Q8TB24 985 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 LEO1Q8WVC0 666 aaPredicted RBP15.9■□□□□ 0.14
NDE1-203ENST00000570727 USP13Q92995 863 aaPredicted RBP15.9■□□□□ 0.14
NDE1-203ENST00000570727 CHFRQ96EP1 664 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 GCNAQ96QF7 691 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 PDE11AQ9HCR9 933 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 HPS4Q9NQG7 708 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 THG1LQ9NWX6 298 aaKnown RBP15.9■□□□□ 0.14
NDE1-203ENST00000570727 GDAP2Q9NXN4 497 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 DDX43Q9NXZ2 648 aaKnown RBP15.9■□□□□ 0.14
NDE1-203ENST00000570727 SIX4Q9UIU6 781 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 NCOR2Q9Y618 2525 aa15.9■□□□□ 0.14
NDE1-203ENST00000570727 OTOL1A6NHN0 477 aaPredicted RBP15.89■□□□□ 0.13
NDE1-203ENST00000570727 GABRDO14764 452 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 HUS1O60921 280 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 ACAT1P24752 427 aaKnown RBP15.89■□□□□ 0.13
NDE1-203ENST00000570727 CYP2F1P24903 491 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 STAT6P42226 847 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 ATXN1P54253 815 aaKnown RBP15.89■□□□□ 0.13
NDE1-203ENST00000570727 TSPY1Q01534 308 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 SRSF5Q13243 272 aaKnown RBP15.89■□□□□ 0.13
NDE1-203ENST00000570727 ALCAMQ13740 583 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 NFE2Q16621 373 aaPredicted RBP15.89■□□□□ 0.13
NDE1-203ENST00000570727 DDR2Q16832 855 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 CCDC142Q17RM4 750 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 TXNDC8Q6A555 127 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 LAIR1Q6GTX8 287 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 TMEM86AQ8N2M4 240 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 LRRC52Q8N7C0 313 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 INTS4Q96HW7 963 aaKnown RBP15.89■□□□□ 0.13
NDE1-203ENST00000570727 TDP1Q9NUW8 608 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 ZMYM5Q9UJ78 669 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 GTF3C4Q9UKN8 822 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 ITGA11Q9UKX5 1188 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 ANAPC1Q9H1A4 1944 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 SPTBN2O15020 2390 aa15.89■□□□□ 0.13
NDE1-203ENST00000570727 SDK1Q7Z5N4 2213 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 GREB1Q4ZG55 1949 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 SOBPA7XYQ1 873 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 HCRTO43612 131 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 CSH1P0DML2 217 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 CSH2P0DML3 217 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 DDX6P26196 483 aaKnown RBP eCLIP15.88■□□□□ 0.13
NDE1-203ENST00000570727 HOXA6P31267 233 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 HOXD13P35453 343 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 RBP5P82980 135 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 SPEM2Q0P670 501 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 BFSP1Q12934 665 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 RUNX3Q13761 415 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 SOWAHAQ2M3V2 549 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 INTS6LQ5JSJ4 861 aaKnown RBP15.88■□□□□ 0.13
NDE1-203ENST00000570727 TRIM68Q6AZZ1 485 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 MON1AQ86VX9 555 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 SYNPOQ8N3V7 929 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 PDILTQ8N807 584 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 MYRFLQ96LU7 910 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 TMEM206Q9H813 350 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 ABCB6Q9NP58 842 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 GMEB2Q9UKD1 530 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 RAB23Q9ULC3 237 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 USP18Q9UMW8 372 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 MAGED2Q9UNF1 606 aaPredicted RBP15.88■□□□□ 0.13
NDE1-203ENST00000570727 SNX9Q9Y5X1 595 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 LAMA1P25391 3075 aa15.88■□□□□ 0.13
NDE1-203ENST00000570727 PRR5-ARHGAP8B1AHC4 643 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 TADA3O75528 432 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 NOL4O94818 638 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 RETP07949 1114 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 KRT19P08727 400 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 SDHBP21912 280 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 CNR2P34972 360 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 AVPR1AP37288 418 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 NASPP49321 788 aaPredicted RBP15.87■□□□□ 0.13
NDE1-203ENST00000570727 ARHGAP8P85298 464 aa15.87■□□□□ 0.13
NDE1-203ENST00000570727 MYL7Q01449 175 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms