RNA–Protein interactions for RNA: ENST00000570063.5

RSRP1-222, Transcript of arginine and serine rich protein 1, human

TSL 5

Gene RSRP1, Length 1,821 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSRP1-222	ENST00000570063	SNX17	Q15036	470 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	CCNG2	Q16589	344 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	CEP85L	Q5SZL2	805 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	SYDE1	Q6ZW31	735 aa	Predicted RBP	18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	SH2D3C	Q8N5H7	860 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	ARFGAP1	Q8N6T3	406 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	FNIP1	Q8TF40	1166 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	UBLCP1	Q8WVY7	318 aa	Predicted RBP	18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	SOCS4	Q8WXH5	440 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	FAM129A	Q9BZQ8	928 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	NXF3	Q9H4D5	531 aa	Known RBP	18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	KLHL11	Q9NVR0	708 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	CNTN3	Q9P232	1028 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	PARP2	Q9UGN5	583 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	GOLGA8S	H3BPF8	625 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	PTPN7	P35236	360 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	PSMC1	P62191	440 aa	Known RBP	18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	ADCY2	Q08462	1091 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	PDCL	Q13371	301 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	ZNF268	Q14587	947 aa	Predicted RBP	18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	MFSD7	Q6UXD7	560 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	TTC39C	Q8N584	583 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	C18orf25	Q96B23	403 aa	Predicted RBP	18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	RNF25	Q96BH1	459 aa	Predicted RBP	18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	MCRS1	Q96EZ8	462 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	RBM41	Q96IZ5	413 aa	Known RBP	18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	AP5M1	Q9H0R1	490 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	WDR35	Q9P2L0	1181 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	ATP8A1	Q9Y2Q0	1164 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	NME7	Q9Y5B8	376 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	TRIP11	Q15643	1979 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	FAM155A	B1AL88	458 aa	Predicted RBP	18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	PI4K2B	G5E9Z4	385 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063		M0QYV0	167 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	RECQL4	O94761	1208 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	KRT3	P12035	628 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	SKOR1	P84550	965 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	UBXN11	Q5T124	520 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	EMC10	Q5UCC4	262 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	RHBDF2	Q6PJF5	856 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	LCLAT1	Q6UWP7	414 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	TRPV1	Q8NER1	839 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	ATP6V1G3	Q96LB4	118 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	HEXIM2	Q96MH2	286 aa	Known RBP	18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	HOMER3	Q9NSC5	361 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	KIAA1257	Q9ULG3	409 aa		18.81	■□□□□ 0.6
RSRP1-222	ENST00000570063	PDCD11	Q14690	1871 aa	Known RBP	18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	KRT1	P04264	644 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	PFKM	P08237	780 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	CAPN2	P17655	700 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	INHBE	P58166	350 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	PURA	Q00577	322 aa	Known RBP	18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	SLC25A11	Q02978	314 aa	Known RBP	18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	PPP1R7	Q15435	360 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	FSCN1	Q16658	493 aa	Known RBP	18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	KCTD16	Q68DU8	428 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	SPOCD1	Q6ZMY3	1216 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	LRRC52	Q8N7C0	313 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	ATL2	Q8NHH9	583 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	RAPGEF5	Q92565	580 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	MRPL45	Q9BRJ2	306 aa	Known RBP	18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	LRRC4C	Q9HCJ2	640 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	WHRN	Q9P202	907 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	SCN1A	P35498	2009 aa		18.8	■□□□□ 0.6
RSRP1-222	ENST00000570063	ERICH4	A6NGS2	130 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	C3orf70	A6NLC5	250 aa	Predicted RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	KRT10	P13645	584 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	PMS2	P54278	862 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	COPS2	P61201	443 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	MYO1E	Q12965	1108 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	CRHR2	Q13324	411 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	XKR4	Q5GH76	650 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	POLN	Q7Z5Q5	900 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	BEST2	Q8NFU1	509 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	GRK7	Q8WTQ7	553 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	KATNAL1	Q9BW62	490 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	NT5C1A	Q9BXI3	368 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	PABPC3	Q9H361	631 aa	Known RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	ZFYVE28	Q9HCC9	887 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	METTL5	Q9NRN9	209 aa	Known RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	DDX56	Q9NY93	547 aa	Known RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	PRDM4	Q9UKN5	801 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	TRIP12	Q14669	1992 aa	Predicted RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	hCG_1818297	A0A087WSY0	165 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	MYADML2	A6NDP7	307 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	HMGB1P1	B2RPK0	211 aa	Predicted RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	TNPO2	O14787	897 aa	Known RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	LRCH4	O75427	683 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	RPS6KA5	O75582	802 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	NUDT17	P0C025	328 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	PSMA2	P25787	234 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	CRYBB1	P53674	252 aa	Predicted RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	YARS	P54577	528 aa	Known RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	PKDCC	Q504Y2	493 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	UBA3	Q8TBC4	463 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	FAM118B	Q9BPY3	351 aa		18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	MTRF1L	Q9UGC7	380 aa	Known RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	PIN4	Q9Y237	131 aa	Known RBP	18.79	■□□□□ 0.6
RSRP1-222	ENST00000570063	C17orf102	A2RUQ5	167 aa		18.78	■□□□□ 0.6
RSRP1-222	ENST00000570063	AKAP5	P24588	427 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms