RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PIGHQ14442 188 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 HLTFQ14527 1009 aaKnown RBP eCLIP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 SLMAPQ14BN4 828 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ACAP1Q15027 740 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 GRIK4Q16099 956 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 TAZQ16635 292 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF699Q32M78 642 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 DCAF4L1Q3SXM0 396 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF568Q3ZCX4 644 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF667Q5HYK9 610 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 AADACL2Q6P093 401 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 TTC27Q6P3X3 843 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 CCDC137Q6PK04 289 aaKnown RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ZDHHC24Q6UX98 284 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ALKAL1Q6UXT8 129 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 MMS22LQ6ZRQ5 1243 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 TMC3Q7Z5M5 1100 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ERICH1Q86X53 443 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 CPNE8Q86YQ8 564 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ANKMY2Q8IV38 441 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 NME8Q8N427 588 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 C1orf127Q8N9H9 656 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 C3orf20Q8ND61 904 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 NPLOC4Q8TAT6 608 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 GIPC2Q8TF65 315 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 RIN2Q8WYP3 895 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 TFAP2BQ92481 460 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 HHIPL1Q96JK4 782 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 NLRP4Q96MN2 994 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ACAP3Q96P50 834 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 FMO2Q99518 471 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 CELF4Q9BZC1 486 aaKnown RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 TRIM7Q9C029 511 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 DCLK3Q9C098 648 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 NEUROG2Q9H2A3 272 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 PABPC3Q9H361 631 aaKnown RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 GRHL1Q9NZI5 618 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ITGA11Q9UKX5 1188 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 STRIP2Q9ULQ0 834 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 SNX24Q9Y343 169 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 NEU2Q9Y3R4 380 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 NRCAMQ92823 1304 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 FAM155AB1AL88 458 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 HAS3O00219 553 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 IGF2BP3O00425 579 aaKnown RBP eCLIP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 TP73O15350 636 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 KPNA6O60684 536 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 CILPO75339 1184 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 GPR32O75388 356 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 TOMM70O94826 608 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 ECEL1O95672 775 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 F2P00734 622 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 F12P00748 615 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 IVLP07476 585 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 NFICP08651 508 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 MYZAPP0CAP1 466 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF865P0CJ78 1059 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 CXCL8P10145 99 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 RARGP13631 454 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 CAPN2P17655 700 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 HOXA11P31270 313 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 FLT3P36888 993 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 RPL21P46778 160 aaKnown RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 PMS2P54278 862 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 PLTPP55058 493 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 TAS2R40P59535 323 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 RPL7AP62424 266 aaKnown RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 IGBP1P78318 339 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 LACTBP83111 547 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 LMNB2Q03252 620 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF844Q08AG5 666 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 NFX1Q12986 1120 aaKnown RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 PTK6Q13882 451 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 TMEM132DQ14C87 1099 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 STILQ15468 1287 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 WDR72Q3MJ13 1102 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 SGO2Q562F6 1265 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 TTMPQ5BVD1 217 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 XKR4Q5GH76 650 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 GJC2Q5T442 439 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-213ENST00000569687 OLFML2BQ68BL8 750 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 JADE1Q6IE81 842 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 DENND1BQ6P3S1 775 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 DNAJC24Q6P3W2 148 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 RHBDF2Q6PJF5 856 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 LCLAT1Q6UWP7 414 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 C17orf99Q6UX52 265 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 KDM7AQ6ZMT4 941 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 POLNQ7Z5Q5 900 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 RELL1Q8IUW5 271 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 TMEM192Q8IY95 271 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 CCDC105Q8IYK2 499 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 CEP120Q8N960 986 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 SLC4A11Q8NBS3 891 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 BBOF1Q8ND07 529 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 OR6J1Q8NGC5 347 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 GRK7Q8WTQ7 553 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 KAT2BQ92831 832 aa5.69□□□□□ -1.5
SF3B3-213ENST00000569687 C18orf8Q96DM3 657 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms