RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 SCN5AQ14524 2016 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 TET1Q8NFU7 2136 aa8.11□□□□□ -1.11
CDH13-214ENST00000569455 PIEZO1Q92508 2521 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 GRID2IPA4D2P6 1211 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 A8MXQ7 604 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 CYB561D2O14569 222 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 ENC1O14682 589 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 FANCGO15287 622 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 POMCP01189 267 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 CALCAP01258 141 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 ATP1A1P05023 1023 aaKnown RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 SETSIPP0DME0 302 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 CSF2RAP15509 400 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 WARSP23381 471 aaKnown RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 GNL1P36915 607 aaPredicted RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 CCL23P55773 120 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 SNX16P57768 344 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 CKAP4Q07065 602 aaKnown RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 WHAMMP3Q1A5X7 153 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 SOWAHAQ2M3V2 549 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 RASIP1Q5U651 963 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 C11orf63Q6NUN7 778 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 DSTYKQ6XUX3 929 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 MON1BQ7L1V2 547 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 PEX26Q7Z412 305 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 DAAM2Q86T65 1068 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 RTN4RL1Q86UN2 441 aaPredicted RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 ERICH1Q86X53 443 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 DNAAF5Q86Y56 855 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 ADGRF2Q8IZF7 708 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 ABI1Q8IZP0 508 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 TMEM130Q8N3G9 435 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 CEP112Q8N8E3 955 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 C1orf131Q8NDD1 294 aaKnown RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 DBF4BQ8NFT6 615 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 ZNF564Q8TBZ8 553 aaPredicted RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 SPATA18Q8TC71 538 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 CPA5Q8WXQ8 436 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 HERVK_113Q902F9 699 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 TFAP2BQ92481 460 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 ARHGEF26Q96DR7 871 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 TNIP3Q96KP6 325 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 FAM193BQ96PV7 902 aaPredicted RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 TWNKQ96RR1 684 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 MRPL45Q9BRJ2 306 aaKnown RBP8.1□□□□□ -1.11
CDH13-214ENST00000569455 C11orf70Q9BRQ4 267 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 NUP85Q9BW27 656 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 MIOSQ9NXC5 875 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 HESX1Q9UBX0 185 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 AMFRQ9UKV5 643 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 SNX12Q9UMY4 172 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDH13-214ENST00000569455 HCN4Q9Y3Q4 1203 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 PCDHB7Q9Y5E2 793 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 TTC3P53804 2025 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 MICAL3Q7RTP6 2002 aa8.1□□□□□ -1.11
CDH13-214ENST00000569455 CASTOR2A6NHX0 329 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 M0QYV0 167 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 O00370 1275 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 ENPP3O14638 875 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 SPTLC1O15269 473 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 KIF4AO95239 1232 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 ODC1P11926 461 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 MMP8P22894 467 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 RRM1P23921 792 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 LHX1P48742 406 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 CLCNKBP51801 687 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 TUBB4BP68371 445 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 AMPD2Q01433 879 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 TAP1Q03518 808 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 RNASELQ05823 741 aaKnown RBP8.09□□□□□ -1.11
CDH13-214ENST00000569455 GPNMBQ14956 572 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 RPS6KA1Q15418 735 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 UPP1Q16831 310 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 NOMO2Q5JPE7 1267 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 TMEM240Q5SV17 173 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 MEI1Q5TIA1 1274 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 ARHGAP17Q68EM7 881 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 DENND1BQ6P3S1 775 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 DCLRE1AQ6PJP8 1040 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 LCLAT1Q6UWP7 414 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 MMS22LQ6ZRQ5 1243 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 LIMS2Q7Z4I7 341 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 SLFN11Q7Z7L1 901 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 ACOT1Q86TX2 421 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 METTL23Q86XA0 190 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 CRYBG2Q8N1P7 616 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 LRRC57Q8N9N7 239 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 IPO4Q8TEX9 1081 aaKnown RBP8.09□□□□□ -1.11
CDH13-214ENST00000569455 KBTBD7Q8WVZ9 684 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 LINC01599Q8WXQ3 324 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 SCLYQ96I15 445 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 RPGRIP1Q96KN7 1286 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 SENP8Q96LD8 212 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 ZSWIM1Q9BR11 485 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 C1QTNF1Q9BXJ1 281 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 TLR10Q9BXR5 811 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 MRPL9Q9BYD2 267 aaKnown RBP8.09□□□□□ -1.11
CDH13-214ENST00000569455 SYNCQ9H7C4 482 aa8.09□□□□□ -1.11
CDH13-214ENST00000569455 OSGEPQ9NPF4 335 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms