RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 PARM1Q6UWI2 310 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 PDZD4Q76G19 769 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 SPATA2LQ8IUW3 424 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 SLC9A9Q8IVB4 645 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 DCP1BQ8IZD4 617 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 TOP6BLQ8N6T0 577 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 TAS1R2Q8TE23 839 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 KBTBD7Q8WVZ9 684 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 FGF13Q92913 245 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 MYLPFQ96A32 169 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 SYT15Q9BQS2 421 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 SDCBP2Q9H190 292 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 SLITRK6Q9H5Y7 841 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 KCNK12Q9HB15 430 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 ZNF334Q9HCZ1 680 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 LMBRD1Q9NUN5 540 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 PCDHB5Q9Y5E4 795 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 MUC3AQ02505 3323 aa9.66□□□□□ -0.86
GTF3C1-210ENST00000569394 NOTCH4Q99466 2003 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 A0A1W2PRU2 124 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 A8MXQ7 604 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 CLDN5O00501 218 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 LAMP2P13473 410 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 ATF6P18850 670 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 BDNFP23560 247 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 CCNE1P24864 410 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 LHX1P48742 406 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 ZXDAP98168 799 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 CYP4F8P98187 520 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 PTPN21Q16825 1174 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 HSP90AA4PQ58FG1 418 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 TMEM31Q5JXX7 168 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 STXBP5Q5T5C0 1151 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 INTS8Q75QN2 995 aaKnown RBP9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 DNAJB7Q7Z6W7 309 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 TMEM86AQ8N2M4 240 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 SPATA20Q8TB22 786 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 FGF14Q92915 247 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 SYAP1Q96A49 352 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 ZSWIM3Q96MP5 696 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 GBP4Q96PP9 640 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 MED10Q9BTT4 135 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 XYLT2Q9H1B5 865 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 DNAJC25Q9H1X3 360 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 ATXN3LQ9H3M9 355 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 CRTAC1Q9NQ79 661 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 ASAH2Q9NR71 780 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 GDAP2Q9NXN4 497 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 NUMBLQ9Y6R0 609 aa9.65□□□□□ -0.86
GTF3C1-210ENST00000569394 C2orf72A6NCS6 295 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 ATMINO43313 823 aaPredicted RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 HAPLN1P10915 354 aaPredicted RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 WARSP23381 471 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 PAX3P23760 479 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 GABRR2P28476 465 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 PCSK1P29120 753 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 GRIK1P39086 918 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 FKBP3Q00688 224 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 PAK1Q13153 545 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 GRM2Q14416 872 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 SGSM1Q2NKQ1 1148 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 EDRF1Q3B7T1 1238 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 ZNF394Q53GI3 561 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 ACOT1Q86TX2 421 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 NPAS3Q8IXF0 933 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 ZDHHC14Q8IZN3 488 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 GPT2Q8TD30 523 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 SEMA4DQ92854 862 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 TATDN2Q93075 761 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 JAKMIP2Q96AA8 810 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 DHTKD1Q96HY7 919 aaPredicted RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 DUSP9Q99956 384 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 ACBD6Q9BR61 282 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 LRFN3Q9BTN0 628 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 PLA2G2FQ9BZM2 168 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 SMG9Q9H0W8 520 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 NUP62CLQ9H1M0 184 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 CLSTN2Q9H4D0 955 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 KIAA1468Q9P260 1216 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 MAGEC2Q9UBF1 373 aaPredicted RBP9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 HMGXB4Q9UGU5 601 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 FBXL21Q9UKT6 434 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 CDH7Q9ULB5 785 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 CA14Q9ULX7 337 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 SORCS3Q9UPU3 1222 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 USTQ9Y2C2 406 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 HCN4Q9Y3Q4 1203 aa9.64□□□□□ -0.87
GTF3C1-210ENST00000569394 DOCK8Q8NF50 2099 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 TMEM221A6NGB7 291 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 M0R296 226 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 GABRDO14764 452 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 ABL1P00519 1130 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 CCDC130P13994 396 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 PTPN1P18031 435 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 ADORA2BP29275 332 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms