RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TAF2	Q6P1X5	1199 aa		4.43	□□□□□ -1.7
UBR1-209	ENST00000569243	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.43	□□□□□ -1.7
UBR1-209	ENST00000569243	ARHGEF3	Q9NR81	526 aa		4.43	□□□□□ -1.7
UBR1-209	ENST00000569243	SERPINB13	Q9UIV8	391 aa		4.43	□□□□□ -1.7
UBR1-209	ENST00000569243	BTBD3	Q9Y2F9	522 aa		4.43	□□□□□ -1.7
UBR1-209	ENST00000569243	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.43	□□□□□ -1.7
UBR1-209	ENST00000569243	MYO1F	O00160	1098 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	INSIG1	O15503	277 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	MOSPD3	O75425	235 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	RHO	P08100	348 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	NDUFB7	P17568	137 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	CDK11B	P21127	795 aa	Known RBP	4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	KEL	P23276	732 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	PCSK6	P29122	969 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	CD6	P30203	668 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	PSMC1	P62191	440 aa	Known RBP	4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	ITK	Q08881	620 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	TBCC	Q15814	346 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	UAP1L1	Q3KQV9	507 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	RBM20	Q5T481	1227 aa	Known RBP	4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	RNF187	Q5TA31	235 aa	Predicted RBP	4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	MORN5	Q5VZ52	161 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	NEK8	Q86SG6	692 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	PNMA8A	Q86V59	439 aa	Predicted RBP	4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	MIER2	Q8N344	545 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	PRR18	Q8N4B5	295 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	CAMKK1	Q8N5S9	505 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	PPP1R10	Q96QC0	940 aa	Known RBP	4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	TBC1D30	Q9Y2I9	924 aa		4.42	□□□□□ -1.7
UBR1-209	ENST00000569243	CADPS	Q9ULU8	1353 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	DTNB	O60941	627 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	GNAI2	P04899	355 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	GCLC	P48506	637 aa	Predicted RBP	4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	TOB1	P50616	345 aa	Predicted RBP	4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	HK3	P52790	923 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	ABCB5	Q2M3G0	1257 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	PROSER3	Q2NL68	480 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	EMC10	Q5UCC4	262 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	FAM160B1	Q5W0V3	765 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	ICE2	Q659A1	982 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	SLC30A10	Q6XR72	485 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	USP43	Q70EL4	1123 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	SLC29A4	Q7RTT9	530 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	USP37	Q86T82	979 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	MRPL46	Q9H2W6	279 aa	Known RBP	4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	SMOC2	Q9H3U7	446 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	SERGEF	Q9UGK8	458 aa		4.41	□□□□□ -1.7
UBR1-209	ENST00000569243	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	SLC16A3	O15427	465 aa	Known RBP	4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	IGSF3	O75054	1194 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	EBLN1	P0CF75	366 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	JUP	P14923	745 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	PDC	P20941	246 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	CCKAR	P32238	428 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	NOG	Q13253	232 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	MIDN	Q504T8	468 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	SLC9A4	Q6AI14	798 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	MTHFD1L	Q6UB35	978 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	KLHDC4	Q8TBB5	520 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	REPS1	Q96D71	796 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	BHMT2	Q9H2M3	363 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	NRIP3	Q9NQ35	241 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	DKK3	Q9UBP4	350 aa		4.4	□□□□□ -1.71
UBR1-209	ENST00000569243	TUBB4A	P04350	444 aa		4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	ATXN1L	P0C7T5	689 aa	Known RBP	4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	PPIF	P30405	207 aa	Known RBP	4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	RECQL	P46063	649 aa	Predicted RBP	4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	HEATR3	Q7Z4Q2	680 aa		4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	ZDHHC17	Q8IUH5	632 aa		4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	FANCB	Q8NB91	859 aa		4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	RP9	Q8TA86	221 aa	Known RBP	4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	MTMR8	Q96EF0	704 aa		4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	TNKS	O95271	1327 aa		4.39	□□□□□ -1.71
UBR1-209	ENST00000569243	PPP6C	O00743	305 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	ZNF213	O14771	459 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	TJP3	O95049	919 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	KIF20A	O95235	890 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	PIM1	P11309	404 aa	Predicted RBP	4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	CCND1	P24385	295 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	GTF2H3	Q13889	308 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	ODF1	Q14990	250 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	PTPN21	Q16825	1174 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	ZNF260	Q3ZCT1	412 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	VPS53	Q5VIR6	699 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	USP45	Q70EL2	814 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	CPA6	Q8N4T0	437 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	FBXO41	Q8TF61	875 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	MOGAT1	Q96PD6	335 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	TMEM79	Q9BSE2	394 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	C1orf43	Q9BWL3	253 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	ANLN	Q9NQW6	1124 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	DLL3	Q9NYJ7	618 aa		4.38	□□□□□ -1.71
UBR1-209	ENST00000569243	ZNF112	Q9UJU3	913 aa		4.38	□□□□□ -1.71

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