RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 ADAM12O43184 909 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 CHMP2AO43633 222 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 GAS7O60861 476 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 ERLIN2O94905 339 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 P4HBP07237 508 aaKnown RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 PTPN2P17706 415 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 CSRP1P21291 193 aaKnown RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 MCM5P33992 734 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 ARL4DP49703 201 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 PTH1RQ03431 593 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 SPIRE1Q08AE8 756 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 ELAVL2Q12926 359 aaKnown RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 PCBP1Q15365 356 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDH13-212ENST00000569144 FOXD4L6Q3SYB3 417 aaPredicted RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDH13-212ENST00000569144 FAM78AQ5JUQ0 283 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 PRSS36Q5K4E3 855 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 FAM171A1Q5VUB5 890 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 HGSNATQ68CP4 663 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 TCEAL6Q6IPX3 200 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 NOTUMQ6P988 496 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 VITQ6UXI7 678 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 FOXD4L3Q6VB84 417 aaPredicted RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 Q6ZS52 159 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 PDZD3Q86UT5 571 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 CEP57Q86XR8 500 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 RAB11FIP4Q86YS3 637 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 EXOC6Q8TAG9 804 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 SMARCD2Q92925 531 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 TCEAL3Q969E4 200 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 ZC3H10Q96K80 434 aaKnown RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 APOL6Q9BWW8 343 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 TEKT3Q9BXF9 490 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 MRPL18Q9H0U6 180 aaKnown RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 UNC45AQ9H3U1 944 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 C8orf33Q9H7E9 229 aaPredicted RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 OSGEPQ9NPF4 335 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 RBM28Q9NW13 759 aaKnown RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 C2orf42Q9NWW7 574 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 KCNK4Q9NYG8 393 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 MSRB2Q9Y3D2 182 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 HES2Q9Y543 173 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 MYH9P35579 1960 aaKnown RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 CNOT1A5YKK6 2376 aaKnown RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 ARHGEF37A1IGU5 675 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 WDR27A2RRH5 827 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 ANKRD33BA6NCL7 494 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 ZNF197O14709 1029 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 ZNF263O14978 683 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 MSH4O15457 936 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 TSPAN1O60635 241 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 LRG1P02750 347 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 SRGAP2CP0DJJ0 459 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 CCDC192P0DO97 292 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 ESRRAP11474 423 aaPredicted RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 HOXC13P31276 330 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 OR1D2P34982 312 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 NCBP1Q09161 790 aaKnown RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 C19orf57Q0VDD7 668 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 LAMTOR4Q0VGL1 99 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 TUSC3Q13454 348 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 SUZ12Q15022 739 aaKnown RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 PLK5Q496M5 336 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 LRCH2Q5VUJ6 765 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 ANO5Q75V66 913 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 MIER3Q7Z3K6 550 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 SGMS1Q86VZ5 419 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 MICU3Q86XE3 530 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 PROSER1Q86XN7 944 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 MFSD6LQ8IWD5 586 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 EXOC8Q8IYI6 725 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 SYNPOQ8N3V7 929 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 CSGALNACT1Q8TDX6 532 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 HASPINQ8TF76 798 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 PRPF31Q8WWY3 499 aaKnown RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 PSPC1Q8WXF1 523 aaKnown RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 RABGGTAQ92696 567 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 SLC5A5Q92911 643 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 TCEAL4Q96EI5 215 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 PAAF1Q9BRP4 392 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 TRIM6Q9C030 488 aaPredicted RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 CSRNP2Q9H175 543 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 NXF3Q9H4D5 531 aaKnown RBP6.51□□□□□ -1.37
CDH13-212ENST00000569144 TRPV4Q9HBA0 871 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 ABCB6Q9NP58 842 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 MTRRQ9UBK8 725 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 NBEAQ8NFP9 2946 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 IGF2RP11717 2491 aa6.51□□□□□ -1.37
CDH13-212ENST00000569144 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
CDH13-212ENST00000569144 GCN1Q92616 2671 aaKnown RBP6.5□□□□□ -1.37
CDH13-212ENST00000569144 TMEM238LA0A1B0GVL6 79 aa6.5□□□□□ -1.37
CDH13-212ENST00000569144 ESYT2A0FGR8 921 aa6.5□□□□□ -1.37
CDH13-212ENST00000569144 LNP1A1A4G5 178 aa6.5□□□□□ -1.37
CDH13-212ENST00000569144 MYBPHLA2RUH7 354 aa6.5□□□□□ -1.37
CDH13-212ENST00000569144 CASTOR2A6NHX0 329 aa6.5□□□□□ -1.37
CDH13-212ENST00000569144 SLC38A8A6NNN8 435 aa6.5□□□□□ -1.37
CDH13-212ENST00000569144 HEPACAM2A8MVW5 462 aa6.5□□□□□ -1.37
CDH13-212ENST00000569144 SPECC1L-ADORA2AF8WAN1 911 aa6.5□□□□□ -1.37
CDH13-212ENST00000569144 CHADO15335 359 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms