RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 TBCCQ15814 346 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 PDK4Q16654 411 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 HIF1AQ16665 826 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 QPCTQ16769 361 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 P3H1Q32P28 736 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 NBPF20Q3BBV1 942 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SLC45A4Q5BKX6 768 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 WASHC2DQ5SRD0 308 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SNRNP48Q6IEG0 339 aaKnown RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ABHD15Q6UXT9 468 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ANO5Q75V66 913 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 BZW1Q7L1Q6 419 aaKnown RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 PALB2Q86YC2 1186 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 NT5DC4Q86YG4 428 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 BRSK2Q8IWQ3 736 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SCUBE3Q8IX30 993 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 PALM2Q8IXS6 379 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 LMNTD2Q8IXW0 634 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SCYL3Q8IZE3 742 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ANKRD42Q8N9B4 389 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ZNF280CQ8ND82 737 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 RAB3IL1Q8TBN0 382 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SEMA4DQ92854 862 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 LRRC39Q96DD0 335 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ZBED3Q96IU2 234 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 CYTH2Q99418 400 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 C11orf70Q9BRQ4 267 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 TCHPQ9BT92 498 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 GCOM2Q9BZD3 368 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 VPS11Q9H270 941 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 TRABDQ9H4I3 376 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SYNCQ9H7C4 482 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 VPS37BQ9H9H4 285 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 RSAD1Q9HA92 442 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 CYP3A43Q9HB55 503 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 POLD4Q9HCU8 107 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SAYSD1Q9NPB0 183 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ARHGEF3Q9NR81 526 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 FGFR1OP2Q9NVK5 253 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 CLUHO75153 1309 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 MROH7Q68CQ1 1323 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 SLX4Q8IY92 1834 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 RGPD3A6NKT7 1758 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-250ENST00000568290 RGPD4Q7Z3J3 1758 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 SSC5DA1L4H1 1573 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 A0A0B4J269 797 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 SGK1O00141 431 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ADCY3O60266 1144 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ATP2C2O75185 946 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 KRT37O76014 449 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ATG7O95352 703 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 TGDSO95455 350 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 NEFHP12036 1026 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ALADP13716 330 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 CCNB1P14635 433 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 KCNA2P16389 499 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ATF7P17544 494 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-250ENST00000568290 CA4P22748 312 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 IVDP26440 423 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 KLRC2P26717 231 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 MARCKSL1P49006 195 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ARSEP51690 589 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ZNF280AP59817 542 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-250ENST00000568290 TGFB2P61812 414 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 CDK18Q07002 472 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 GPS1Q13098 491 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 CBLBQ13191 982 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 TMED2Q15363 201 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 GALNTL6Q49A17 601 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 MTERF2Q49AM1 385 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ATG16L1Q676U5 607 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 CCDC62Q6P9F0 684 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 SPOCD1Q6ZMY3 1216 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 TBC1D1Q86TI0 1168 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-250ENST00000568290 TRABD2AQ86V40 505 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 SRRM1Q8IYB3 904 aaKnown RBP8.03□□□□□ -1.12
ATXN3-250ENST00000568290 AFG1LQ8WV93 481 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 SREK1Q8WXA9 508 aaKnown RBP8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ZNF606Q8WXB4 792 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 CPA5Q8WXQ8 436 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ZNF516Q92618 1163 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 MTBPQ96DY7 904 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 SLITRK1Q96PX8 696 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 TRIM55Q9BYV6 548 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 TMEM39BQ9GZU3 492 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ADAM7Q9H2U9 754 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 MMADHCQ9H3L0 296 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-250ENST00000568290 CXorf56Q9H5V9 222 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 DHX33Q9H6R0 707 aaKnown RBP8.03□□□□□ -1.12
ATXN3-250ENST00000568290 EBF2Q9HAK2 575 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 CHST7Q9NS84 486 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 HOMER2Q9NSB8 354 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 FBXO28Q9NVF7 368 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 ANKFY1Q9P2R3 1169 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 USTQ9Y2C2 406 aa8.03□□□□□ -1.12
ATXN3-250ENST00000568290 MTO1Q9Y2Z2 717 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms