RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 NECTIN4Q96NY8 510 aa18.39■□□□□ 0.53
COMMD4-220ENST00000567720 HCFC1R1Q9NWW0 138 aa18.39■□□□□ 0.53
COMMD4-220ENST00000567720 GTF3C4Q9UKN8 822 aa18.39■□□□□ 0.53
COMMD4-220ENST00000567720 CLUHO75153 1309 aa18.39■□□□□ 0.53
COMMD4-220ENST00000567720 ANAPC1Q9H1A4 1944 aa18.39■□□□□ 0.53
COMMD4-220ENST00000567720 A8MXQ7 604 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 P4HA2O15460 535 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 LRG1P02750 347 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 PDGFRBP09619 1106 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 FAM163BP0C2L3 166 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-220ENST00000567720 MTIF2P46199 727 aaKnown RBP18.38■□□□□ 0.53
COMMD4-220ENST00000567720 TWF1Q12792 350 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 ORC1Q13415 861 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 CDKAL1Q5VV42 579 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 FAM171BQ6P995 826 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 CYP26C1Q6V0L0 522 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 FAM114A1Q8IWE2 563 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 CCDC150Q8NCX0 1101 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 SPPL2BQ8TCT7 592 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 C2orf15Q8WU43 125 aaKnown RBP18.38■□□□□ 0.53
COMMD4-220ENST00000567720 SEPT5Q99719 369 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-220ENST00000567720 LPIN3Q9BQK8 851 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 SLC27A5Q9Y2P5 690 aa18.38■□□□□ 0.53
COMMD4-220ENST00000567720 KCNJ18B7U540 433 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 XYLBO75191 536 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 ATF6P18850 670 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 SP100P23497 879 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-220ENST00000567720 NTHL1P78549 312 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 MYL5Q02045 173 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 SMARCB1Q12824 385 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 KCNJ12Q14500 433 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 NFKBIBQ15653 356 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 NFE2Q16621 373 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-220ENST00000567720 MAN2A1Q16706 1144 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 MDH1BQ5I0G3 518 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 ATAT1Q5SQI0 421 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 GRASPQ7Z6J2 395 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-220ENST00000567720 CREBRFQ8IUR6 639 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 B3GALNT2Q8NCR0 500 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 LMO3Q8TAP4 145 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 TATDN2Q93075 761 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 TWNKQ96RR1 684 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 PHF7Q9BWX1 381 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-220ENST00000567720 PIDD1Q9HB75 910 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 WDR6Q9NNW5 1121 aaKnown RBP18.37■□□□□ 0.53
COMMD4-220ENST00000567720 GCNT4Q9P109 453 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 CEP72Q9P209 647 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 HSFX1Q9UBD0 423 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 PCDHB5Q9Y5E4 795 aa18.37■□□□□ 0.53
COMMD4-220ENST00000567720 TRIOO75962 3097 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 HAPLN1P10915 354 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-220ENST00000567720 CD58P19256 250 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 HELZP42694 1942 aaKnown RBP18.36■□□□□ 0.53
COMMD4-220ENST00000567720 NDST1P52848 882 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 LRMPQ12912 555 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 NCAPHQ15003 741 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 MGAT5BQ3V5L5 792 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 CFAP221Q4G0U5 840 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 WDR44Q5JSH3 913 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 MIIPQ5JXC2 388 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 ADHFE1Q8IWW8 467 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 AOPEPQ8N6M6 819 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 MYCBPAPQ8TBZ2 947 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 PCED1BQ96HM7 432 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 CYP3A43Q9HB55 503 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 ABCB6Q9NP58 842 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 DNMT3BQ9UBC3 853 aaKnown RBP18.36■□□□□ 0.53
COMMD4-220ENST00000567720 MAGEC2Q9UBF1 373 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-220ENST00000567720 PRKAG3Q9UGI9 489 aa18.36■□□□□ 0.53
COMMD4-220ENST00000567720 NRG2O14511 850 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-220ENST00000567720 CILPO75339 1184 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 PTPN1P18031 435 aaKnown RBP18.35■□□□□ 0.53
COMMD4-220ENST00000567720 CYP2F1P24903 491 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 GPR15P49685 360 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 PLD1Q13393 1074 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 CUL2Q13617 745 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 SKOR2Q2VWA4 1001 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-220ENST00000567720 ZSCAN23Q3MJ62 389 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 TCP11X2Q5H9J9 407 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 SPATA2LQ8IUW3 424 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-220ENST00000567720 STKLD1Q8NE28 680 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 WHAMMQ8TF30 809 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 FUBP3Q96I24 572 aaKnown RBP eCLIP18.35■□□□□ 0.53
COMMD4-220ENST00000567720 FAXDC2Q96IV6 333 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 UHRF1Q96T88 793 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-220ENST00000567720 INTS2Q9H0H0 1204 aaKnown RBP18.35■□□□□ 0.53
COMMD4-220ENST00000567720 HSD3B7Q9H2F3 369 aa18.35■□□□□ 0.53
COMMD4-220ENST00000567720 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-220ENST00000567720 EEF1GP26641 437 aaKnown RBP18.34■□□□□ 0.53
COMMD4-220ENST00000567720 CYP27A1Q02318 531 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 MAPRE1Q15691 268 aaKnown RBP18.34■□□□□ 0.53
COMMD4-220ENST00000567720 SLC5A9Q2M3M2 681 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 C4orf50Q6ZRC1 276 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 GET4Q7L5D6 327 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-220ENST00000567720 ACOT1Q86TX2 421 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 UNC93AQ86WB7 457 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 TMC8Q8IU68 726 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 ARHGEF19Q8IW93 802 aa18.34■□□□□ 0.53
COMMD4-220ENST00000567720 UBR7Q8N806 425 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms