RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CLK1P49759 484 aaKnown RBP12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 NCALDP61601 193 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 MTRQ99707 1265 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 SAR1AQ9NR31 198 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 CLIC5Q9NZA1 410 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 SIK3Q9Y2K2 1263 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 TM9SF1O15321 606 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 SFNP31947 248 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 HADHAP40939 763 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 NUP107P57740 925 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 TBL3Q12788 808 aaKnown RBP12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 NCOA4Q13772 614 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 LRRC8BQ6P9F7 803 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 FAM81AQ8TBF8 368 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 WDR60Q8WVS4 1066 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZNF341Q9BYN7 854 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 JMJD4Q9H9V9 463 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 E9PBE3 544 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 PIK3CDO00329 1044 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 TBC1D4O60343 1298 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 KLHL41O60662 606 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 ALBP02768 609 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 GZMAP12544 262 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 VCAM1P19320 739 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 ADRA1DP25100 572 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 NME3Q13232 169 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 CCNG2Q16589 344 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 C6orf10Q5SRN2 563 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 ITPRIPL1Q6GPH6 555 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 A1CFQ9NQ94 594 aaKnown RBP12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 LRRC4BQ9NT99 713 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 SOX13Q9UN79 622 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 NFIBO00712 420 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 GFAPP14136 432 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 CYP11B1P15538 503 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 KCNA2P16389 499 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 DCAF15Q66K64 600 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 COA1Q9GZY4 146 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 ILKAPQ9H0C8 392 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 BRD8Q9H0E9 1235 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZCWPW1Q9H0M4 648 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 RSAD1Q9HA92 442 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 EFCAB1Q9HAE3 211 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 CPS1P31327 1500 aa12.92□□□□□ -0.34
CSPG4P13-202ENST00000567704 DNM1LO00429 736 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 PSTPIP1O43586 416 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 MAP3K6O95382 1288 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 ETS2P15036 469 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 CIITAP33076 1130 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 RGS7P49802 495 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 RAP1GDS1P52306 607 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 DCTN2Q13561 401 aaKnown RBP12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 BMPR2Q13873 1038 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 FAM196AQ6ZSG2 479 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 KDELC2Q7Z4H8 507 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 PYDC1Q8WXC3 89 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 GCNAQ96QF7 691 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 ASPSCR1Q9BZE9 553 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 AGPSO00116 658 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 AADACL2Q6P093 401 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 SGF29Q96ES7 293 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 GORASP1Q9BQQ3 440 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 GRIP2Q9C0E4 1043 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 RUBCNLQ9H714 662 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 WDR35Q9P2L0 1181 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 DLGAP3O95886 979 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 RAG1P15918 1043 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 CRKP46108 304 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 EIF2B2P49770 351 aaKnown RBP12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 CYP4A22Q5TCH4 519 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 GPAT2Q6NUI2 795 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 FRA10AC1Q70Z53 315 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 RFWD2Q8NHY2 731 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 STAP1Q9ULZ2 295 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 PGM3O95394 542 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 SSTR1P30872 391 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 GTF2H1P32780 548 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 RPL10AP62906 217 aaKnown RBP12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 GIT2Q14161 759 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 IMPG1Q17R60 797 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 EFHC2Q5JST6 749 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 KCNT1Q5JUK3 1230 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 SPDYCQ5MJ68 293 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZBTB49Q6ZSB9 765 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 PRUNE1Q86TP1 453 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 CCDC103Q8IW40 242 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 OR9Q1Q8NGQ5 310 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZNF483Q8TF39 744 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 TMEM79Q9BSE2 394 aa12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 SARS2Q9NP81 518 aaKnown RBP12.91□□□□□ -0.34
CSPG4P13-202ENST00000567704 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 GTPBP10A4D1E9 387 aaKnown RBP12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 A8MUI8 341 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 LGR5O75473 907 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 SLC45A4Q5BKX6 768 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms