RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 EXOC3O60645 756 aa12□□□□□ -0.49
CDH3-206ENST00000567674 PDGFBP01127 241 aaPredicted RBP12□□□□□ -0.49
CDH3-206ENST00000567674 CEBPBP17676 345 aa12□□□□□ -0.49
CDH3-206ENST00000567674 TNNI1P19237 187 aa12□□□□□ -0.49
CDH3-206ENST00000567674 FCARP24071 287 aa12□□□□□ -0.49
CDH3-206ENST00000567674 RPL13P26373 211 aaKnown RBP12□□□□□ -0.49
CDH3-206ENST00000567674 CCR2P41597 374 aa12□□□□□ -0.49
CDH3-206ENST00000567674 MGAT5BQ3V5L5 792 aa12□□□□□ -0.49
CDH3-206ENST00000567674 COBLL1Q53SF7 1204 aa12□□□□□ -0.49
CDH3-206ENST00000567674 FAM78AQ5JUQ0 283 aa12□□□□□ -0.49
CDH3-206ENST00000567674 TANGO2Q6ICL3 276 aa12□□□□□ -0.49
CDH3-206ENST00000567674 CBWD2Q8IUF1 395 aa12□□□□□ -0.49
CDH3-206ENST00000567674 GUF1Q8N442 669 aaKnown RBP12□□□□□ -0.49
CDH3-206ENST00000567674 PARD3BQ8TEW8 1205 aa12□□□□□ -0.49
CDH3-206ENST00000567674 PKMYT1Q99640 499 aa12□□□□□ -0.49
CDH3-206ENST00000567674 MTMR12Q9C0I1 747 aa12□□□□□ -0.49
CDH3-206ENST00000567674 TBC1D17Q9HA65 648 aa12□□□□□ -0.49
CDH3-206ENST00000567674 KIF9Q9HAQ2 790 aa12□□□□□ -0.49
CDH3-206ENST00000567674 SLC39A2Q9NP94 309 aa12□□□□□ -0.49
CDH3-206ENST00000567674 DLGAP2Q9P1A6 1054 aa12□□□□□ -0.49
CDH3-206ENST00000567674 FBXO4Q9UKT5 387 aa12□□□□□ -0.49
CDH3-206ENST00000567674 L1RE1Q9UN81 338 aa12□□□□□ -0.49
CDH3-206ENST00000567674 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
CDH3-206ENST00000567674 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 ZNF263O14978 683 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 KRT19P08727 400 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 P4HA1P13674 534 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 PPP1R2P41236 205 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 AFMP43652 599 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 AMPD2Q01433 879 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 STK4Q13043 487 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 ZNF268Q14587 947 aaPredicted RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 TAF12Q16514 161 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 SOWAHAQ2M3V2 549 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 ARHGAP29Q52LW3 1261 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 FOXD4L5Q5VV16 416 aaPredicted RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 ZC3H14Q6PJT7 736 aaKnown RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 KRBA2Q6ZNG9 492 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 LRRTM3Q86VH5 581 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 ADGRF2Q8IZF7 708 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 SHKBP1Q8TBC3 707 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 ZSCAN18Q8TBC5 510 aaPredicted RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 FOXD4L4Q8WXT5 416 aaPredicted RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 EXOC4Q96A65 974 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 TCEAL4Q96EI5 215 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 TIGD1Q96MW7 591 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 PGLYRP2Q96PD5 576 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 GSDMAQ96QA5 445 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 RPP25Q9BUL9 199 aaKnown RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 FAM126AQ9BYI3 521 aaPredicted RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 BCO2Q9BYV7 579 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 DNAI2Q9GZS0 605 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 IKZF4Q9H2S9 585 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 CRISPLD1Q9H336 500 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 KCTD10Q9H3F6 313 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 SMOC2Q9H3U7 446 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 BRD9Q9H8M2 597 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 ZNF334Q9HCZ1 680 aaPredicted RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 RMND1Q9NWS8 449 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 THG1LQ9NWX6 298 aaKnown RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 HOOK1Q9UJC3 728 aaKnown RBP11.99□□□□□ -0.49
CDH3-206ENST00000567674 FRMD4BQ9Y2L6 1034 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 SLC27A5Q9Y2P5 690 aa11.99□□□□□ -0.49
CDH3-206ENST00000567674 SCN1AP35498 2009 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 A0A1B0GVL5 298 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 STK25O00506 426 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 NOL4O94818 638 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 OR4Q2P0C623 313 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 MYL4P12829 197 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 TCF3P15923 654 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 TRIM21P19474 475 aaKnown RBP11.98□□□□□ -0.49
CDH3-206ENST00000567674 GABRR2P28476 465 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 NDUFA8P51970 172 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 WNT7BP56706 349 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 DPYDQ12882 1025 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 BFSP1Q12934 665 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 TRPC3Q13507 836 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 PPP2R5DQ14738 602 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 SGSM1Q2NKQ1 1148 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 INTS8Q75QN2 995 aaKnown RBP11.98□□□□□ -0.49
CDH3-206ENST00000567674 GAREM2Q75VX8 874 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 SPATA2LQ8IUW3 424 aaPredicted RBP11.98□□□□□ -0.49
CDH3-206ENST00000567674 ARID3BQ8IVW6 561 aaPredicted RBP11.98□□□□□ -0.49
CDH3-206ENST00000567674 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 SYNPOQ8N3V7 929 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 CELF5Q8N6W0 485 aaKnown RBP11.98□□□□□ -0.49
CDH3-206ENST00000567674 GLIS3Q8NEA6 775 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 ZSWIM2Q8NEG5 633 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 OR5B17Q8NGF7 314 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 MYCBPAPQ8TBZ2 947 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 TMEM209Q96SK2 561 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 SEPT5Q99719 369 aaPredicted RBP11.98□□□□□ -0.49
CDH3-206ENST00000567674 MKNK1Q9BUB5 465 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 BLZF1Q9H2G9 400 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 ATXN3LQ9H3M9 355 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 COMMD8Q9NX08 183 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 MAGEC2Q9UBF1 373 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms