RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 EHD2Q9NZN4 543 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 ZNF233A6NK53 670 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 PPP6R2O75170 966 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 PAPSS2O95340 614 aaPredicted RBP19.99■□□□□ 0.79
LINC01238-205ENST00000567549 SNRPFP62306 86 aaKnown RBP19.99■□□□□ 0.79
LINC01238-205ENST00000567549 LAIR1Q6GTX8 287 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 C4orf50Q6ZRC1 276 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 SPATA2LQ8IUW3 424 aaPredicted RBP19.99■□□□□ 0.79
LINC01238-205ENST00000567549 TMEM130Q8N3G9 435 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 PDCL2Q8N4E4 241 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 IQUBQ8NA54 791 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 GIPC2Q8TF65 315 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 CEP295NLQ96MC4 621 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 USP28Q96RU2 1077 aa19.99■□□□□ 0.79
LINC01238-205ENST00000567549 DDX43Q9NXZ2 648 aaKnown RBP19.99■□□□□ 0.79
LINC01238-205ENST00000567549 ZNF638Q14966 1978 aaKnown RBP19.99■□□□□ 0.79
LINC01238-205ENST00000567549 COL4A3Q01955 1670 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 SPTLC2O15270 562 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 EIF3DO15371 548 aaKnown RBP eCLIP19.98■□□□□ 0.79
LINC01238-205ENST00000567549 ATG13O75143 517 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 CYP4F8P98187 520 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 DUOXA2Q1HG44 320 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 INTS6LQ5JSJ4 861 aaKnown RBP19.98■□□□□ 0.79
LINC01238-205ENST00000567549 STXBP5Q5T5C0 1151 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 PDILTQ8N807 584 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 C1orf127Q8N9H9 656 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 TRMT2BQ96GJ1 504 aaKnown RBP19.98■□□□□ 0.79
LINC01238-205ENST00000567549 MKNK1Q9BUB5 465 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 TDP1Q9NUW8 608 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 MTMR6Q9Y217 621 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 SNX9Q9Y5X1 595 aa19.98■□□□□ 0.79
LINC01238-205ENST00000567549 ZNF292O60281 2723 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 SHISA7A6NL88 538 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 LRP3O75074 770 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 YEATS4O95619 227 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 HSP90AA1P07900 732 aaKnown RBP19.97■□□□□ 0.79
LINC01238-205ENST00000567549 NLRP12P59046 1061 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 KCNA1Q09470 495 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 GRSF1Q12849 480 aaKnown RBP eCLIP19.97■□□□□ 0.79
LINC01238-205ENST00000567549 ZNF268Q14587 947 aaPredicted RBP19.97■□□□□ 0.79
LINC01238-205ENST00000567549 CFAP221Q4G0U5 840 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 TSSK4Q6SA08 328 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 LRRTM3Q86VH5 581 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 ADGRF2Q8IZF7 708 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 LINC00301Q8NCQ3 95 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 CCDC26Q8TAB7 109 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 PI4K2AQ9BTU6 479 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 PANK2Q9BZ23 570 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 IL21Q9HBE4 155 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 L1RE1Q9UN81 338 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 MAGED2Q9UNF1 606 aaPredicted RBP19.97■□□□□ 0.79
LINC01238-205ENST00000567549 UBE4BO95155 1302 aa19.97■□□□□ 0.79
LINC01238-205ENST00000567549 NRG2O14511 850 aaPredicted RBP19.96■□□□□ 0.79
LINC01238-205ENST00000567549 CUTAO60888 179 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 ASIC1P78348 528 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 PDGFRLQ15198 375 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 FAM173BQ6P4H8 233 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 HS2ST1Q7LGA3 356 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 MON1AQ86VX9 555 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 LONP2Q86WA8 852 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 WDR49Q8IV35 697 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 MAB21L3Q8N8X9 362 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 RMDN1Q96DB5 314 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 RSPRY1Q96DX4 576 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 FNBP1Q96RU3 617 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 CBWD1Q9BRT8 395 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 SLC46A2Q9BY10 475 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 PCIF1Q9H4Z3 704 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 PDE11AQ9HCR9 933 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 GTSE1Q9NYZ3 720 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 CGNQ9P2M7 1197 aaKnown RBP19.96■□□□□ 0.79
LINC01238-205ENST00000567549 USP18Q9UMW8 372 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 DENND4CQ5VZ89 1909 aa19.96■□□□□ 0.79
LINC01238-205ENST00000567549 GOLGA8IPA6NC78 632 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 GOLGA8JA6NMD2 632 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 PRPF6O94906 941 aaKnown RBP19.95■□□□□ 0.78
LINC01238-205ENST00000567549 PRAMEF12O95522 483 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 PFKLP17858 780 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 HOXA6P31267 233 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 MAGEA11P43364 429 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 CASP5P51878 434 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 PRR23BQ6ZRT6 265 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 DCLK2Q8N568 766 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 MTMR12Q9C0I1 747 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 INTS13Q9NVM9 706 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 KBTBD4Q9NVX7 518 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 FAM13BQ9NYF5 915 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 CDV3Q9UKY7 258 aaKnown RBP19.95■□□□□ 0.78
LINC01238-205ENST00000567549 CDH9Q9ULB4 789 aa19.95■□□□□ 0.78
LINC01238-205ENST00000567549 TRAV19A0A0A6YYK7 116 aa19.94■□□□□ 0.78
LINC01238-205ENST00000567549 F11P03951 625 aa19.94■□□□□ 0.78
LINC01238-205ENST00000567549 RETP07949 1114 aa19.94■□□□□ 0.78
LINC01238-205ENST00000567549 USP17L7P0C7H9 530 aa19.94■□□□□ 0.78
LINC01238-205ENST00000567549 TDGF1P13385 188 aa19.94■□□□□ 0.78
LINC01238-205ENST00000567549 ANXA13P27216 316 aa19.94■□□□□ 0.78
LINC01238-205ENST00000567549 ANP32AP39687 249 aaKnown RBP19.94■□□□□ 0.78
LINC01238-205ENST00000567549 NR1H3Q13133 447 aa19.94■□□□□ 0.78
LINC01238-205ENST00000567549 RUNX3Q13761 415 aa19.94■□□□□ 0.78
LINC01238-205ENST00000567549 SIM2Q14190 667 aaPredicted RBP19.94■□□□□ 0.78
LINC01238-205ENST00000567549 PON2Q15165 354 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms