RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 YIPF1Q9Y548 306 aa13.27□□□□□ -0.29
RNF40-211ENST00000567365 CCL16O15467 120 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 N4BP1O75113 896 aaKnown RBP13.26□□□□□ -0.29
RNF40-211ENST00000567365 CCDC192P0DO97 292 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 HAPLN1P10915 354 aaPredicted RBP13.26□□□□□ -0.29
RNF40-211ENST00000567365 ATF6P18850 670 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 PTMSP20962 102 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 GNL1P36915 607 aaPredicted RBP13.26□□□□□ -0.29
RNF40-211ENST00000567365 TYRO3Q06418 890 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 NCAPHQ15003 741 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 STX1AQ16623 288 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 CDKAL1Q5VV42 579 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 POTEHQ6S545 545 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 DCP1BQ8IZD4 617 aaKnown RBP13.26□□□□□ -0.29
RNF40-211ENST00000567365 CRYBG2Q8N1P7 616 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 UBR7Q8N806 425 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 MYCBPAPQ8TBZ2 947 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 WHAMMQ8TF30 809 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 FUBP3Q96I24 572 aaKnown RBP eCLIP13.26□□□□□ -0.29
RNF40-211ENST00000567365 HSD3B7Q9H2F3 369 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 DPEP3Q9H4B8 488 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 SAMSN1Q9NSI8 373 aaKnown RBP13.26□□□□□ -0.29
RNF40-211ENST00000567365 HCFC1R1Q9NWW0 138 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 DNMT3BQ9UBC3 853 aaKnown RBP13.26□□□□□ -0.29
RNF40-211ENST00000567365 HMGXB4Q9UGU5 601 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
RNF40-211ENST00000567365 GREB1Q4ZG55 1949 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 CLUHO75153 1309 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 FAM86C2PA6NEL3 165 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 NRG2O14511 850 aaPredicted RBP13.25□□□□□ -0.29
RNF40-211ENST00000567365 PRRG1O14668 218 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 AFPP02771 609 aaKnown RBP13.25□□□□□ -0.29
RNF40-211ENST00000567365 PDGFRBP09619 1106 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 P4HA1P13674 534 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
RNF40-211ENST00000567365 ELF1P32519 619 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 MAGEA11P43364 429 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 PSMC1P62191 440 aaKnown RBP13.25□□□□□ -0.29
RNF40-211ENST00000567365 MIIPQ5JXC2 388 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 PRSS36Q5K4E3 855 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 SCARA5Q6ZMJ2 495 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 PAQR9Q6ZVX9 377 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 UNC93AQ86WB7 457 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 TMC8Q8IU68 726 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 OR6B3Q8NGW1 331 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 MYLPFQ96A32 169 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 TWNKQ96RR1 684 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 LPIN3Q9BQK8 851 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 FAM124BQ9H5Z6 455 aaPredicted RBP13.25□□□□□ -0.29
RNF40-211ENST00000567365 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.294e-6■■■■■ 56.5
RNF40-211ENST00000567365 SLC27A5Q9Y2P5 690 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 PCDHB5Q9Y5E4 795 aa13.25□□□□□ -0.29
RNF40-211ENST00000567365 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.25□□□□□ -0.29
RNF40-211ENST00000567365 XYLBO75191 536 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 CILPO75339 1184 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 MOSPD3O75425 235 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 SOAT2O75908 522 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 LRG1P02750 347 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 ZNF18P17022 549 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
RNF40-211ENST00000567365 TUFMP49411 452 aaKnown RBP13.24□□□□□ -0.29
RNF40-211ENST00000567365 NDST1P52848 882 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 NTHL1P78549 312 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 TWF1Q12792 350 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 GRASPQ7Z6J2 395 aaPredicted RBP13.24□□□□□ -0.29
RNF40-211ENST00000567365 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 ARID3AQ99856 593 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 SNX25Q9H3E2 840 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 TMEM30AQ9NV96 361 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 NFE2L3Q9Y4A8 694 aa13.24□□□□□ -0.29
RNF40-211ENST00000567365 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
RNF40-211ENST00000567365 A8MXQ7 604 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 C2CD4DB7Z1M9 353 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 HMGA1P17096 107 aaKnown RBP13.23□□□□□ -0.29
RNF40-211ENST00000567365 ACO1P21399 889 aaKnown RBP13.23□□□□□ -0.29
RNF40-211ENST00000567365 CYP2F1P24903 491 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 CCR2P41597 374 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 CDR1P51861 262 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 PLD1Q13393 1074 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 CUL2Q13617 745 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 MAPRE1Q15691 268 aaKnown RBP13.23□□□□□ -0.29
RNF40-211ENST00000567365 MAN2A1Q16706 1144 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 SLC5A9Q2M3M2 681 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 TCP11X2Q5H9J9 407 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 APTXQ7Z2E3 356 aaKnown RBP13.23□□□□□ -0.29
RNF40-211ENST00000567365 ZDHHC14Q8IZN3 488 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 FUKQ8N0W3 1084 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 ITFG1Q8TB96 612 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 PSMG2Q969U7 264 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 MYADMQ96S97 322 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 BPIFA3Q9BQP9 254 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 B3GNT5Q9BYG0 378 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 ELOVL4Q9GZR5 314 aa13.23□□□□□ -0.29
RNF40-211ENST00000567365 IL21Q9HBE4 155 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms