RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 DSC2Q02487 901 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 MAPK7Q13164 816 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 MTMR1Q13613 665 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 KIF22Q14807 665 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 PROSER3Q2NL68 480 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 SUPT20HL1Q3ZLR7 823 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 CEP78Q5JTW2 689 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 AARS2Q5JTZ9 985 aaKnown RBP4.29□□□□□ -1.72
CDH1-211ENST00000567320 TREML2Q5T2D2 321 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 THEMIS2Q5TEJ8 643 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 ICE2Q659A1 982 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 C11orf87Q6NUJ2 197 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 ANKRD16Q6P6B7 361 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 HEATR3Q7Z4Q2 680 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 PNLDC1Q8NA58 520 aaKnown RBP4.29□□□□□ -1.72
CDH1-211ENST00000567320 FAM46DQ8NEK8 389 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 NELL2Q99435 816 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 SERHLQ9NQF3 203 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 SERTAD3Q9UJW9 196 aa4.29□□□□□ -1.72
CDH1-211ENST00000567320 PRSS29PA6NIE9 313 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 KCNU1A8MYU2 1149 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 H0YIZ8 118 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 SLC16A3O15427 465 aaKnown RBP4.28□□□□□ -1.72
CDH1-211ENST00000567320 TLR5O60602 858 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 DNAJB5O75953 348 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 FTLP02792 175 aaPredicted RBP4.28□□□□□ -1.72
CDH1-211ENST00000567320 FTH1P19P0C7X4 201 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 NHLRC4P0CG21 123 aaPredicted RBP4.28□□□□□ -1.72
CDH1-211ENST00000567320 SSBP2P81877 361 aaPredicted RBP4.28□□□□□ -1.72
CDH1-211ENST00000567320 FAM160B1Q5W0V3 765 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 SFRP4Q6FHJ7 346 aaPredicted RBP4.28□□□□□ -1.72
CDH1-211ENST00000567320 MAVSQ7Z434 540 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDH1-211ENST00000567320 DDX17Q92841 729 aaKnown RBP4.28□□□□□ -1.72
CDH1-211ENST00000567320 SLC46A1Q96NT5 459 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 WDCPQ9H6R7 721 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.28□□□□□ -1.72
CDH1-211ENST00000567320 BTBD3Q9Y2F9 522 aa4.28□□□□□ -1.72
CDH1-211ENST00000567320 TISP43B9A030 160 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 PRRT4C9JH25 899 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 GABRDO14764 452 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 AHSGP02765 367 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 TUBB4AP04350 444 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 FESP07332 822 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 CDK11BP21127 795 aaKnown RBP4.27□□□□□ -1.73
CDH1-211ENST00000567320 PCSK6P29122 969 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 LIPAP38571 399 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 ARHGAP25P42331 645 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 KRTAP10-9P60411 292 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 NOGQ13253 232 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 ODF1Q14990 250 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 RNF187Q5TA31 235 aaPredicted RBP4.27□□□□□ -1.73
CDH1-211ENST00000567320 ARHGAP40Q5TG30 622 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 WDR53Q7Z5U6 358 aaPredicted RBP4.27□□□□□ -1.73
CDH1-211ENST00000567320 FAM90A1Q86YD7 464 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 XAGE5Q8WWM1 108 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 RGMAQ96B86 450 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 REPS1Q96D71 796 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 ZNF48Q96MX3 618 aaPredicted RBP4.27□□□□□ -1.73
CDH1-211ENST00000567320 SMAD5Q99717 465 aaKnown RBP4.27□□□□□ -1.73
CDH1-211ENST00000567320 ANLNQ9NQW6 1124 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 DLL3Q9NYJ7 618 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 ZDHHC8Q9ULC8 765 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 PCDHA1Q9Y5I3 950 aa4.27□□□□□ -1.73
CDH1-211ENST00000567320 ZNF213O14771 459 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 PPEF2O14830 753 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 LATS1O95835 1130 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 ONECUT2O95948 504 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 IL6RP08887 468 aaPredicted RBP4.26□□□□□ -1.73
CDH1-211ENST00000567320 NPSP0C0P6 89 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 KCNJ5P48544 419 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 PXNP49023 591 aaPredicted RBP4.26□□□□□ -1.73
CDH1-211ENST00000567320 TOB1P50616 345 aaPredicted RBP4.26□□□□□ -1.73
CDH1-211ENST00000567320 FHL1Q13642 323 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 BOP1Q14137 746 aaKnown RBP4.26□□□□□ -1.73
CDH1-211ENST00000567320 LONRF3Q496Y0 759 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 EGFLAMQ63HQ2 1017 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 MIS18BP1Q6P0N0 1132 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 DTX2Q86UW9 622 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 C5orf34Q96MH7 638 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
CDH1-211ENST00000567320 GLOD4Q9HC38 313 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 LMBRD1Q9NUN5 540 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 ELOVL5Q9NYP7 299 aa4.26□□□□□ -1.73
CDH1-211ENST00000567320 H3BUI4 141 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 FZD9O00144 591 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 SLC16A6O15403 523 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 MOSPD3O75425 235 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 PIM1P11309 404 aaPredicted RBP4.25□□□□□ -1.73
CDH1-211ENST00000567320 PDCP20941 246 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 ZNF134P52741 427 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 LILRA4P59901 499 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 CYP4F2P78329 520 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 KRT85P78386 507 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 HOXA4Q00056 320 aaPredicted RBP4.25□□□□□ -1.73
CDH1-211ENST00000567320 SATB1Q01826 763 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 SP2Q02086 613 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 EXOSC9Q06265 439 aaKnown RBP4.25□□□□□ -1.73
CDH1-211ENST00000567320 IQCB1Q15051 598 aa4.25□□□□□ -1.73
CDH1-211ENST00000567320 RABEP1Q15276 862 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms