RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 FAM118BQ9BPY3 351 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 LRP12Q9Y561 859 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 FAM90A10PA6NDY2 464 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 E5RJQ4 531 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 POC1B-GALNT4F8VUJ3 575 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 H7C1Q1 480 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 PPM1DO15297 605 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 NDUFS2O75306 463 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 USP1O94782 785 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 EYA4O95677 639 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 IL6RP08887 468 aaPredicted RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 CHRM5P08912 532 aaPredicted RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 NPSP0C0P6 89 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 ZNF135P52742 658 aaPredicted RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 PDE1AP54750 535 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 LRRC41Q15345 812 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 TBC1D25Q3MII6 688 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 VPS53Q5VIR6 699 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 PARS2Q7L3T8 475 aaKnown RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 GALNT4Q8N4A0 578 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 LRRC71Q8N4P6 559 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 SMRP1Q8NCR6 262 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 RP9Q8TA86 221 aaKnown RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 DDX17Q92841 729 aaKnown RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 DAZAP1Q96EP5 407 aaKnown RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 MARK4Q96L34 752 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 GPR35Q9HC97 309 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 DUSP22Q9NRW4 184 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 ZNF112Q9UJU3 913 aa3.11□□□□□ -1.91
SMG1-212ENST00000566328 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 CFAP20Q9Y6A4 193 aaKnown RBP3.11□□□□□ -1.91
SMG1-212ENST00000566328 CCDC187A0A096LP49 1063 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 UBE2Q2LH0YL09 131 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 F2RL2O00254 374 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 VPS4BO75351 444 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 BCAR3O75815 825 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 OAZ2O95190 189 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 ARIH2O95376 493 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 GNAI2P04899 355 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 FTH1P19P0C7X4 201 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 RARBP10826 455 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 MALP21145 153 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 IL1R2P27930 398 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 GCLCP48506 637 aaPredicted RBP3.1□□□□□ -1.91
SMG1-212ENST00000566328 CYP4F2P78329 520 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 Q4G0T1 1027 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 TREML2Q5T2D2 321 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 MTHFD1LQ6UB35 978 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 NAPRTQ6XQN6 538 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 CYP2W1Q8TAV3 490 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 CUL5Q93034 780 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 CAMKK2Q96RR4 588 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 FSD1LQ9BXM9 530 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 SERHLQ9NQF3 203 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 PDGFCQ9NRA1 345 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 MTMR4Q9NYA4 1195 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 ADAMTS5Q9UNA0 930 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 IPPQ9Y573 584 aa3.1□□□□□ -1.91
SMG1-212ENST00000566328 HTRA2O43464 458 aaPredicted RBP3.09□□□□□ -1.91
SMG1-212ENST00000566328 PDHA1P08559 390 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 ENGP17813 658 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 CHRM3P20309 590 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 TCF15Q12870 199 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 IL10RAQ13651 578 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 ACAP2Q15057 778 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 PGM2L1Q6PCE3 622 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 SHC4Q6S5L8 630 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 SLC4A10Q6U841 1118 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 LAYNQ6UX15 382 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 TMEM108Q6UXF1 575 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 MAVSQ7Z434 540 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 IRF2BP2Q7Z5L9 587 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 NRACQ8N912 160 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 C16orf52Q8NHV5 167 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 VRK1Q99986 396 aaPredicted RBP3.09□□□□□ -1.91
SMG1-212ENST00000566328 TUBD1Q9UJT1 453 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 CCNL1Q9UK58 526 aaPredicted RBP3.09□□□□□ -1.91
SMG1-212ENST00000566328 LIMCH1Q9UPQ0 1083 aa3.09□□□□□ -1.91
SMG1-212ENST00000566328 KLHL33A6NCF5 533 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 CCDC154A6NI56 674 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 DSCR3O14972 297 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 KIF20AO95235 890 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 DLDP09622 509 aaKnown RBP3.08□□□□□ -1.92
SMG1-212ENST00000566328 ATP5F1P24539 256 aaPredicted RBP3.08□□□□□ -1.92
SMG1-212ENST00000566328 CNGA1P29973 690 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 LIPAP38571 399 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 KCNJ5P48544 419 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 PIK3CGP48736 1102 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 LINC00205P59089 165 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 GPSM2P81274 684 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 SNAPC2Q13487 334 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 KIF22Q14807 665 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 KHDC1Q4VXA5 237 aaKnown RBP3.08□□□□□ -1.92
SMG1-212ENST00000566328 FAM160B1Q5W0V3 765 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 MEPCEQ7L2J0 689 aaKnown RBP3.08□□□□□ -1.92
SMG1-212ENST00000566328 NOP9Q86U38 636 aaKnown RBP3.08□□□□□ -1.92
SMG1-212ENST00000566328 ABHD11Q8NFV4 315 aa3.08□□□□□ -1.92
SMG1-212ENST00000566328 NSUN6Q8TEA1 469 aaKnown RBP3.08□□□□□ -1.92
SMG1-212ENST00000566328 COG1Q8WTW3 980 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms