RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 TPH1P17752 444 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 RPS19P39019 145 aaKnown RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 CHN2P52757 468 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 SLFN5Q08AF3 891 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 IQCB1Q15051 598 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 MAPKAPK3Q16644 382 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 INSCQ1MX18 579 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 SLC4A8Q2Y0W8 1093 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 FBLN7Q53RD9 439 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 METTL24Q5JXM2 366 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 JAKMIP3Q5VZ66 844 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 FCRL6Q6DN72 434 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 CRTC1Q6UUV9 634 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 ELOA2Q8IYF1 753 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 LGI4Q8N135 537 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 CFAP52Q8N1V2 620 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 IL17REQ8NFR9 667 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 OR52N2Q8NGI0 321 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 SMCR8Q8TEV9 937 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 ZSCAN31Q96LW9 406 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 SLC38A3Q99624 504 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 EIF2AK1Q9BQI3 630 aaKnown RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 FAM167BQ9BTA0 163 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 PCDHAC1Q9H158 963 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 ETAA1Q9NY74 926 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 DKK4Q9UBT3 224 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 ZMYND8Q9ULU4 1186 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 SCAF8Q9UPN6 1271 aaKnown RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 PRRT4C9JH25 899 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 NPIPB6E9PJ23 425 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 NCAM2O15394 837 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 IPO13O94829 963 aaKnown RBP5.89□□□□□ -1.47
CNOT1-209ENST00000566240 PYGLP06737 847 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 EGR1P18146 543 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 LMOD3Q0VAK6 560 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 BOP1Q14137 746 aaKnown RBP5.89□□□□□ -1.47
CNOT1-209ENST00000566240 MAPRE1Q15691 268 aaKnown RBP5.89□□□□□ -1.47
CNOT1-209ENST00000566240 ELAVL1Q15717 326 aaKnown RBP5.89□□□□□ -1.47
CNOT1-209ENST00000566240 TIGD6Q17RP2 521 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 TANGO2Q6ICL3 276 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 TAX1BP1Q86VP1 789 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 KRT73Q86Y46 540 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 STT3BQ8TCJ2 826 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 EID2BQ96D98 161 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 MARS2Q96GW9 593 aaKnown RBP5.89□□□□□ -1.47
CNOT1-209ENST00000566240 SLC46A1Q96NT5 459 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 PRPF18Q99633 342 aaKnown RBP5.89□□□□□ -1.47
CNOT1-209ENST00000566240 SMOQ99835 787 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 KATNAL1Q9BW62 490 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 TTYH3Q9C0H2 523 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 TERF2IPQ9NYB0 399 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 PLA2G3Q9NZ20 509 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 CDYLQ9Y232 598 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 SH3BP1Q9Y3L3 701 aa5.89□□□□□ -1.47
CNOT1-209ENST00000566240 EIF3FO00303 357 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-209ENST00000566240 DCLK1O15075 740 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 ASNA1O43681 348 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 TRIM13O60858 407 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 TSPAN15O95858 294 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 FCER1AP12319 257 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 GCSHP23434 173 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 ATICP31939 592 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 KCNC1P48547 511 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 PTDSS1P48651 473 aaKnown RBP5.88□□□□□ -1.47
CNOT1-209ENST00000566240 TOB1P50616 345 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-209ENST00000566240 PIGFQ07326 219 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 ZNF844Q08AG5 666 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 TAF12Q16514 161 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 MGAT5BQ3V5L5 792 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.88□□□□□ -1.47
CNOT1-209ENST00000566240 TMTC4Q5T4D3 741 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 NT5DC1Q5TFE4 455 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 TCERG1LQ5VWI1 586 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 RAP1GAP2Q684P5 730 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 SULT6B1Q6IMI4 303 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 LIN54Q6MZP7 749 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 SLC30A10Q6XR72 485 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 CCDC28AQ8IWP9 274 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 NSUN7Q8NE18 718 aaKnown RBP5.88□□□□□ -1.47
CNOT1-209ENST00000566240 BHLHE22Q8NFJ8 381 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-209ENST00000566240 MDGA1Q8NFP4 955 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 OTUD7AQ8TE49 926 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-209ENST00000566240 MPP4Q96JB8 637 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 OR14A2Q96R54 314 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 TRIB1Q96RU8 372 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 NELL2Q99435 816 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 MPHOSPH9Q99550 1183 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 REXO4Q9GZR2 422 aaKnown RBP5.88□□□□□ -1.47
CNOT1-209ENST00000566240 PDP2Q9P2J9 529 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 GJD2Q9UKL4 321 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 SHOC2Q9UQ13 582 aa5.88□□□□□ -1.47
CNOT1-209ENST00000566240 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 AQP7P3A6NL99 342 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 COQ9O75208 318 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 ATXN1LP0C7T5 689 aaKnown RBP5.87□□□□□ -1.47
CNOT1-209ENST00000566240 HK1P19367 917 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 EPHB4P54760 987 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 POLE2P56282 527 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms