RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 RPS6KA5O75582 802 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 KIF4AO95239 1232 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 CYP1A1P04798 512 aaPredicted RBP6.62□□□□□ -1.35
CHD9-217ENST00000565832 GHRP10912 638 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 CD19P15391 556 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 CD52P31358 61 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 MRPS6P82932 125 aaKnown RBP6.62□□□□□ -1.35
CHD9-217ENST00000565832 CDC42EP1Q00587 391 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 SLC7A5Q01650 507 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 ZNF211Q13398 564 aaPredicted RBP6.62□□□□□ -1.35
CHD9-217ENST00000565832 RPS6KA1Q15418 735 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 OCLNQ16625 522 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 DCAF12L1Q5VU92 463 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 MMS22LQ6ZRQ5 1243 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 MCOLN2Q8IZK6 566 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 NME8Q8N427 588 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 CEP112Q8N8E3 955 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 ALG3Q92685 438 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 KRT35Q92764 455 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 SNX27Q96L92 541 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 CDK15Q96Q40 435 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 C11orf70Q9BRQ4 267 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 AP1M1Q9BXS5 423 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 ELOVL4Q9GZR5 314 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 ABCB6Q9NP58 842 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 TMPRSS4Q9NRS4 437 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 RBM12Q9NTZ6 932 aaKnown RBP6.62□□□□□ -1.35
CHD9-217ENST00000565832 MIOSQ9NXC5 875 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 CNOT8Q9UFF9 292 aaKnown RBP6.62□□□□□ -1.35
CHD9-217ENST00000565832 CYTH4Q9UIA0 394 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 NR2E1Q9Y466 385 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 DAAM1Q9Y4D1 1078 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 NME7Q9Y5B8 376 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 SNX9Q9Y5X1 595 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 PTCH2Q9Y6C5 1203 aa6.62□□□□□ -1.35
CHD9-217ENST00000565832 A0A0A6YYK5 440 aaPredicted RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 O00370 1275 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 CEP104O60308 925 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 KPNA6O60684 536 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 SEC31AO94979 1220 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 CYP1A2P05177 515 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 PRLRP16471 622 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 COMTP21964 271 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 HOXD10P28358 340 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 SERPINB4P48594 390 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 RPL7AP62424 266 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 NOMO3P69849 1222 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 RBP5P82980 135 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 DCAF4L1Q3SXM0 396 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 CYP4A22Q5TCH4 519 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 TAF2Q6P1X5 1199 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 DENND1BQ6P3S1 775 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 FMNL3Q8IVF7 1028 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 TXLNBQ8N3L3 684 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 SLC4A11Q8NBS3 891 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 TSEN2Q8NCE0 465 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 RNF169Q8NCN4 708 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 C1orf131Q8NDD1 294 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 GSTCDQ8NEC7 633 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 SPATA4Q8NEY3 305 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 GOLGA1Q92805 767 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 HEXIM2Q96MH2 286 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 MRPL45Q9BRJ2 306 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 LRRC1Q9BTT6 524 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 BCO2Q9BYV7 579 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 SENP6Q9GZR1 1112 aaPredicted RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 ZNF446Q9NWS9 450 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 PADI3Q9ULW8 664 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 C2CD2Q9Y426 696 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 TRIM17Q9Y577 477 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 CASP8AP2Q9UKL3 1982 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 TET1Q8NFU7 2136 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 PTGESO14684 152 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 DDX3YO15523 660 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 STAU1O95793 577 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 PDGFRBP09619 1106 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 ITGA4P13612 1032 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 TCP1P17987 556 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 LMO2P25791 158 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 GRK4P32298 578 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 NSFP46459 744 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 NDST1P52848 882 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 YARSP54577 528 aaKnown RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 BPIFB4P59827 614 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 CENPCQ03188 943 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 PTP4A2Q12974 167 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 MAMLD1Q13495 774 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 MTFR1Q15390 333 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 TRADDQ15628 312 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 CCDC142Q17RM4 750 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 SOWAHAQ2M3V2 549 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 C9orf57Q5W0N0 161 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 MON1BQ7L1V2 547 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 RNF180Q86T96 592 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 UBA3Q8TBC4 463 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 ZNF564Q8TBZ8 553 aaPredicted RBP6.61□□□□□ -1.35
CHD9-217ENST00000565832 HES6Q96HZ4 224 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 GAD1Q99259 594 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 PAAF1Q9BRP4 392 aa6.61□□□□□ -1.35
CHD9-217ENST00000565832 CFHR5Q9BXR6 569 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms