RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ACAD9Q9H845 621 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 RAB6BQ9NRW1 208 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 GALNT8Q9NY28 637 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 AFF4Q9UHB7 1163 aaKnown RBP5.29□□□□□ -1.56
SMG1-211ENST00000565324 CDC42BPGQ6DT37 1551 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 CYBBP04839 570 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MUTP22033 750 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PPP2R1BP30154 601 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PPP3CCP48454 512 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 GCLMP48507 274 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CSE1LP55060 971 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 LONRF1Q17RB8 773 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 GSPT2Q8IYD1 628 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 MYCBPAPQ8TBZ2 947 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 AGPAT1Q99943 283 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 RMI1Q9H9A7 625 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 KCND2Q9NZV8 630 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 SLC30A1Q9Y6M5 507 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 FAM92AA1XBS5 289 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 SUPT3HB4E1H0 165 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 BTN3A3O00478 584 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PSMD14O00487 310 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 TRAPPC3O43617 180 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ATP1A1P05023 1023 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 ANXA6P08133 673 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PTPN4P29074 926 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 BTDP43251 543 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 TUBA3CQ13748 450 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CDK20Q8IZL9 346 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 OR6B3Q8NGW1 331 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 DCPSQ96C86 337 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 EAF2Q96CJ1 260 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 PAIP1Q9H074 479 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 EPB41L4BQ9H329 900 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 C8orf4Q9NR00 106 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CYP39A1Q9NYL5 469 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 A0A087WXM4 84 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 RALAP11233 206 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PABPC1P11940 636 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 ATP6V1B2P21281 511 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 RCVRNP35243 200 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 IFNGR2P38484 337 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 NAIF1Q69YI7 327 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 PTRHD1Q6GMV3 140 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 FBXO42Q6P3S6 717 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CASP12Q6UXS9 341 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ZNF184Q99676 751 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 C11orf70Q9BRQ4 267 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 STK33Q9BYT3 514 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 AKAP7Q9P0M2 348 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 ZC3H4Q9UPT8 1303 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 A0A1W2PRG6 482 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PRKAA2P54646 552 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 GTF2IP78347 998 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ZNF211Q13398 564 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 XRCC4Q13426 336 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MTERF2Q49AM1 385 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 WASHC2DQ5SRD0 308 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 IFNEQ86WN2 208 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ZNF496Q96IT1 587 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 INTS2Q9H0H0 1204 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 ZCCHC17Q9NP64 241 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 MOSPD1Q9UJG1 213 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MROH7Q68CQ1 1323 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 F8W810 466 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PHGDHO43175 533 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 CLTBP09497 229 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 CHI3L1P36222 383 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 NME3Q13232 169 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 KIAA0825Q8IV33 1275 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 SH2D3CQ8N5H7 860 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 SAR1AQ9NR31 198 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ATP7BP35670 1465 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 UBE2QL1A1L167 161 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 TEX46H3BTG2 121 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PDXKO00764 312 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MYL4P12829 197 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 TARSP26639 723 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 ADD2P35612 726 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MAGEA4P43358 317 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ACADSBP45954 432 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 QARSP47897 775 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 ARMCX6Q7L4S7 300 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 PIK3C3Q8NEB9 887 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 TRPC4APQ8TEL6 797 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 DCAF4Q8WV16 495 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 C9orf16Q9BUW7 83 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 EIF4A1P60842 406 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 OSTNP61366 133 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ACCSLQ4AC99 568 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 MDH1BQ5I0G3 518 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 SEL1L3Q68CR1 1132 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ZCCHC8Q6NZY4 707 aaKnown RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 WDR93Q6P2C0 686 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 ZBTB49Q6ZSB9 765 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 GPD1LQ8N335 351 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 RNF25Q96BH1 459 aaPredicted RBP5.28□□□□□ -1.56
SMG1-211ENST00000565324 WDR24Q96S15 920 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 INTS13Q9NVM9 706 aa5.28□□□□□ -1.56
SMG1-211ENST00000565324 STK32BQ9NY57 414 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms