RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 MKRN2Q9H000 416 aaKnown RBP6.58□□□□□ -1.36
PTPN9-204ENST00000564970 KIAA1683Q9H0B3 1180 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 C1orf21Q9H246 121 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 DPEP3Q9H4B8 488 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 NHEJ1Q9H9Q4 299 aaPredicted RBP6.58□□□□□ -1.36
PTPN9-204ENST00000564970 OLFML3Q9NRN5 406 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 SLC38A7Q9NVC3 462 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 THG1LQ9NWX6 298 aaKnown RBP6.58□□□□□ -1.36
PTPN9-204ENST00000564970 TBK1Q9UHD2 729 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 ZFP69BQ9UJL9 534 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 CNOT11Q9UKZ1 510 aaKnown RBP6.58□□□□□ -1.36
PTPN9-204ENST00000564970 PNMA3Q9UL41 463 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 GRID1Q9ULK0 1009 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 VPS4AQ9UN37 437 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 SOX13Q9UN79 622 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 SORCS3Q9UPU3 1222 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 CEPT1Q9Y6K0 416 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 TRPM2O94759 1503 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 PTPRUQ92729 1446 aa6.58□□□□□ -1.36
PTPN9-204ENST00000564970 SF3B1O75533 1304 aaKnown RBP eCLIP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 MYO3BQ8WXR4 1341 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 PNMA6FA0A0J9YX94 578 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 C1orf232A0A0U1RR37 186 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 LRRIQ4A6NIV6 560 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 SMIM23A6NLE4 172 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 C16orf96A6NNT2 1141 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 PITPNM1O00562 1244 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ARHGAP33O14559 1287 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 KPNA5O15131 536 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 TEX33O43247 280 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 RAD51CO43502 376 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 JAK2O60674 1132 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 NOL3O60936 208 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ADAM11O75078 769 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ADAMTS4O75173 837 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 KRT36O76013 467 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 BMP10O95393 424 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 IFNA14P01570 189 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 IL1BP01584 269 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 FAM58BPP0C7Q3 252 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 RBP3P10745 1247 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 GLULP15104 373 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 RPS2P15880 293 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ITIH1P19827 911 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 TCEA1P23193 301 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 PTX3P26022 381 aaPredicted RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 IDUAP35475 653 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 STAT1P42224 750 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 SLC9A3P48764 834 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 HARS2P49590 506 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ST13P50502 369 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 CABP4P57796 275 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ERVK-9P63128 1117 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 FMR1Q06787 632 aaKnown RBP eCLIP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 CDC20Q12834 499 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 TARDBPQ13148 414 aaKnown RBP eCLIP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 PNOCQ13519 176 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 IRF5Q13568 498 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 MOGSQ13724 837 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 GALNT3Q14435 633 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 SNX17Q15036 470 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 KRT31Q15323 416 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 LSM12Q3MHD2 195 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 VWA3BQ502W6 1294 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 TNNI3KQ59H18 835 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 TCP11X2Q5H9J9 407 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 SLC9C2Q5TAH2 1124 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 EGFLAMQ63HQ2 1017 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ANKRD40Q6AI12 368 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 DRICH1Q6PGQ1 229 aaPredicted RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 XKRXQ6PP77 449 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 TMC5Q6UXY8 1006 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 MCM10Q7L590 875 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 LPCAT2Q7L5N7 544 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 PRUNE1Q86TP1 453 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ZNF589Q86UQ0 364 aaPredicted RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 FAM124AQ86V42 546 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 CAMK1DQ8IU85 385 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 UNC45BQ8IWX7 931 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 PALM2Q8IXS6 379 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 KIAA2013Q8IYS2 634 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 SRBD1Q8N5C6 995 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 MB21D1Q8N884 522 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 KBTBD3Q8NAB2 608 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 SLC4A11Q8NBS3 891 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 KCT2Q8NC54 265 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 FLAD1Q8NFF5 587 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 BCL7CQ8WUZ0 217 aaPredicted RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 CPLX3Q8WVH0 158 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 KBTBD7Q8WVZ9 684 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 SEPT1Q8WYJ6 367 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 TRIB2Q92519 343 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ANKS1AQ92625 1134 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 LRRC59Q96AG4 307 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 TAMM41Q96BW9 452 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 THAP11Q96EK4 314 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 EDC3Q96F86 508 aaKnown RBP6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ART5Q96L15 291 aa6.57□□□□□ -1.36
PTPN9-204ENST00000564970 ZNF578Q96N58 590 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms