RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 MYBPHLA2RUH7 354 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 SLC16A3O15427 465 aaKnown RBP10.63□□□□□ -0.71
CDH1-206ENST00000564676 STX10O60499 249 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 TACC1O75410 805 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 VNN1O95497 513 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 HLA-DRAP01903 254 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 HAPLN1P10915 354 aaPredicted RBP10.63□□□□□ -0.71
CDH1-206ENST00000564676 P4HA1P13674 534 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 BMP6P22004 513 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 LMO2P25791 158 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 GTF2H1P32780 548 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 STX17P56962 302 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 PSMC1P62191 440 aaKnown RBP10.63□□□□□ -0.71
CDH1-206ENST00000564676 ZXDAP98168 799 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 PPP3CAQ08209 521 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 VEPH1Q14D04 833 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 TAF12Q16514 161 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 DCAF17Q5H9S7 520 aaPredicted RBP10.63□□□□□ -0.71
CDH1-206ENST00000564676 C1orf220Q5T0J3 134 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 TCERG1LQ5VWI1 586 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 SCARA5Q6ZMJ2 495 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 LIMS2Q7Z4I7 341 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 DNAJB7Q7Z6W7 309 aaPredicted RBP10.63□□□□□ -0.71
CDH1-206ENST00000564676 ITIH5Q86UX2 942 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 SPATA2LQ8IUW3 424 aaPredicted RBP10.63□□□□□ -0.71
CDH1-206ENST00000564676 LEMD2Q8NC56 503 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 CCDC150Q8NCX0 1101 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 KBTBD7Q8WVZ9 684 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 ING5Q8WYH8 240 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 TAF4BQ92750 862 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 EDAQ92838 391 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 ELMO3Q96BJ8 720 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 PI4K2AQ9BTU6 479 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 IMPG2Q9BZV3 1241 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 CLSTN2Q9H4D0 955 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 VRTNQ9H8Y1 702 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 KCNK12Q9HB15 430 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 TMEM8AQ9HCN3 771 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 AVENQ9NQS1 362 aaPredicted RBP10.63□□□□□ -0.71
CDH1-206ENST00000564676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDH1-206ENST00000564676 IGSF9Q9P2J2 1179 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 SORCS3Q9UPU3 1222 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 ASB3Q9Y575 518 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 FAM86C2PA6NEL3 165 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 A8MXQ7 604 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 ATP2C2O75185 946 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 CYP2F1P24903 491 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 RAP1GAPP47736 663 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 MXI1P50539 228 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 CDH8P55286 799 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 PAK1Q13153 545 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 TDGQ13569 410 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 MTMR3Q13615 1198 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 MAPRE1Q15691 268 aaKnown RBP10.62□□□□□ -0.71
CDH1-206ENST00000564676 SLC5A9Q2M3M2 681 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 CCDC40Q4G0X9 1142 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 TMEM31Q5JXX7 168 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 KRT39Q6A163 491 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 TTI2Q6NXR4 508 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 FAM171BQ6P995 826 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 C4orf50Q6ZRC1 276 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 FILIP1Q7Z7B0 1213 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 NPAS3Q8IXF0 933 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 ZC3H3Q8IXZ2 948 aaKnown RBP10.62□□□□□ -0.71
CDH1-206ENST00000564676 ST13P5Q8NFI4 369 aaPredicted RBP10.62□□□□□ -0.71
CDH1-206ENST00000564676 TAS1R2Q8TE23 839 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 GIPC2Q8TF65 315 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 NXPE3Q969Y0 559 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 MYLPFQ96A32 169 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 TCEAL4Q96EI5 215 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 MCRS1Q96EZ8 462 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 CEP63Q96MT8 703 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 LPIN3Q9BQK8 851 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 NUP62CLQ9H1M0 184 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 DNAJC25Q9H1X3 360 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 SMYD3Q9H7B4 428 aa10.62□□□□□ -0.71
CDH1-206ENST00000564676 METTL14Q9HCE5 456 aaKnown RBP10.62□□□□□ -0.71
CDH1-206ENST00000564676 MAGEC2Q9UBF1 373 aaPredicted RBP10.62□□□□□ -0.71
CDH1-206ENST00000564676 ARMCX3Q9UH62 379 aaPredicted RBP10.62□□□□□ -0.71
CDH1-206ENST00000564676 ASS1P00966 412 aaKnown RBP10.61□□□□□ -0.71
CDH1-206ENST00000564676 GJA1P17302 382 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 CEBPBP17676 345 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 PTPN1P18031 435 aaKnown RBP10.61□□□□□ -0.71
CDH1-206ENST00000564676 CCR2P41597 374 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 GPR15P49685 360 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 RPL10AP62906 217 aaKnown RBP10.61□□□□□ -0.71
CDH1-206ENST00000564676 NOP14P78316 857 aaKnown RBP10.61□□□□□ -0.71
CDH1-206ENST00000564676 CYP27A1Q02318 531 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 CCDC142Q17RM4 750 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 MDH1BQ5I0G3 518 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 PRSS36Q5K4E3 855 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 SPOPLQ6IQ16 392 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 MTSS1LQ765P7 747 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 SCN4BQ8IWT1 228 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 UBALD2Q8IYN6 164 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 GPR152Q8TDT2 470 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 RSAD2Q8WXG1 361 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 PSMG2Q969U7 264 aa10.61□□□□□ -0.71
CDH1-206ENST00000564676 FUBP3Q96I24 572 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDH1-206ENST00000564676 PKMYT1Q99640 499 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms