RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 ALADP13716 330 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 CCNB1P14635 433 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 KCNA2P16389 499 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ATF7P17544 494 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 CA4P22748 312 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 IVDP26440 423 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 KLRC2P26717 231 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 MARCKSL1P49006 195 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ARSEP51690 589 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ZNF280AP59817 542 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 TGFB2P61812 414 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 CDK18Q07002 472 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 GPS1Q13098 491 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 CBLBQ13191 982 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 TMED2Q15363 201 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 GALNTL6Q49A17 601 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 MTERF2Q49AM1 385 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ATG16L1Q676U5 607 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 CCDC62Q6P9F0 684 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 SPOCD1Q6ZMY3 1216 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 TBC1D1Q86TI0 1168 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 TRABD2AQ86V40 505 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 SRRM1Q8IYB3 904 aaKnown RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 AFG1LQ8WV93 481 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 SREK1Q8WXA9 508 aaKnown RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ZNF606Q8WXB4 792 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 CPA5Q8WXQ8 436 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 MTBPQ96DY7 904 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 SLITRK1Q96PX8 696 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 TRIM55Q9BYV6 548 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 TMEM39BQ9GZU3 492 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ADAM7Q9H2U9 754 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 MMADHCQ9H3L0 296 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 CXorf56Q9H5V9 222 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 DHX33Q9H6R0 707 aaKnown RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 EBF2Q9HAK2 575 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 CHST7Q9NS84 486 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 HOMER2Q9NSB8 354 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 FBXO28Q9NVF7 368 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 ANKFY1Q9P2R3 1169 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 USTQ9Y2C2 406 aa8.03□□□□□ -1.12
ATXN3-249ENST00000564606 MTO1Q9Y2Z2 717 aaKnown RBP8.03□□□□□ -1.12
ATXN3-249ENST00000564606 PSME4Q14997 1843 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 LRRD1A4D1F6 860 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 SIGLEC16A6NMB1 481 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 YDJCA8MPS7 323 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF487B1APH4 448 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 I3L4J1 428 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 WNT10BO00744 389 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 ARHGAP33O14559 1287 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 TRDMT1O14717 391 aaKnown RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 UBOX5O94941 541 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 CCNE2O96020 404 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 ASS1P00966 412 aaKnown RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 IL1BP01584 269 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 ERBB2P04626 1255 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 INHBAP08476 426 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 SLC10A3P09131 477 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 KRT3P12035 628 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 ACO1P21399 889 aaKnown RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 DNAJB2P25686 324 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 CNTFP26441 200 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PCK1P35558 622 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 ARL2P36404 184 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 CCNG1P51959 295 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 IRX4P78413 519 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 JAG1P78504 1218 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 CDC42EP1Q00587 391 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 POU5F1BQ06416 359 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PDK2Q15119 407 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF699Q32M78 642 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 FAM133BQ5BKY9 247 aaKnown RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 CMPK2Q5EBM0 449 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 EFHC2Q5JST6 749 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 ANKRD20A3Q5VUR7 823 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 TDRD10Q5VZ19 366 aaKnown RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PLA2G4FQ68DD2 849 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 VSTM1Q6UX27 236 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 BBS12Q6ZW61 710 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PPFIBP2Q8ND30 876 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PLEKHO2Q8TD55 490 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 MGARPQ8TDB4 240 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 SEPT1Q8WYJ6 367 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 KAT5Q92993 513 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PAIP2Q9BPZ3 127 aaKnown RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 LRMDAQ9H2I8 198 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 COL20A1Q9P218 1284 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PAK5Q9P286 719 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PRKAG3Q9UGI9 489 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 MCM8Q9UJA3 840 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 PHTF1Q9UMS5 762 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 SORCS3Q9UPU3 1222 aa8.02□□□□□ -1.13
ATXN3-249ENST00000564606 RBBP6Q7Z6E9 1792 aaKnown RBP8.02□□□□□ -1.13
ATXN3-249ENST00000564606 COL11A2P13942 1736 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-249ENST00000564606 hCG_1818297A0A087WSY0 165 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms