RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 CNPPD1Q9BV87 410 aa3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 QTRT1Q9BXR0 403 aaKnown RBP3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 TINAGL1Q9GZM7 467 aaPredicted RBP3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 GPR35Q9HC97 309 aa3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 MAN1C1Q9NR34 630 aa3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 ARHGEF3Q9NR81 526 aa3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 SIDT1Q9NXL6 827 aaKnown RBP3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 CFAP97Q9P2B7 532 aa3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 PCDHA1Q9Y5I3 950 aa3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 RAD54BQ9Y620 910 aa3.25□□□□□ -1.89
SUB1P3-201ENST00000564581 TOPBP1Q92547 1522 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 WASHC2CQ9Y4E1 1318 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 KRTAP29-1A8MX34 341 aaPredicted RBP3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 ZNF213O14771 459 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 RPLP2P05387 115 aaKnown RBP3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 CYP2D6P10635 497 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 NDUFB7P17568 137 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 PDCP20941 246 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 CCND1P24385 295 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 LIPAP38571 399 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 CLCN2P51788 898 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 ZNF134P52741 427 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 NOGQ13253 232 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 BMPR2Q13873 1038 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 KLF9Q13886 244 aaPredicted RBP3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 PROSER3Q2NL68 480 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 TMEM108Q6UXF1 575 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 BHLHA9Q7RTU4 235 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 MAVSQ7Z434 540 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 PPP1R32Q7Z5V6 425 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 CATIPQ7Z7H3 387 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 MIER2Q8N344 545 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 FAM109AQ8N4B1 249 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 ZNF366Q8N895 744 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 MACROD1Q9BQ69 325 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 ALG8Q9BVK2 526 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 TTYH3Q9C0H2 523 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 MRPL46Q9H2W6 279 aaKnown RBP3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 FLRT1Q9NZU1 646 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 MROH2BQ7Z745 1585 aa3.24□□□□□ -1.89
SUB1P3-201ENST00000564581 IQSEC2Q5JU85 1478 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 CACNA1IQ9P0X4 2223 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 TISP43B9A030 160 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 H0YIZ8 118 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 DCLK1O15075 740 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 PCF11O94913 1555 aaKnown RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 LATS1O95835 1130 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 FTLP02792 175 aaPredicted RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 ENGP17813 658 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 HDCP19113 662 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 KELP23276 732 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 CYP2C18P33260 490 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 MAP2K6P52564 334 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 SSBP2P81877 361 aaPredicted RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 EXOSC9Q06265 439 aaKnown RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 SLC10A2Q12908 348 aaPredicted RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 ETFDHQ16134 617 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 SUPT20HL1Q3ZLR7 823 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 PLAC9Q5JTB6 97 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 CEP78Q5JTW2 689 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 SUMO4Q6EEV6 95 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 ZNF551Q7Z340 670 aaPredicted RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 YTHDF3Q7Z739 585 aaKnown RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 CELF5Q8N6W0 485 aaKnown RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 RGMAQ96B86 450 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 SLC46A1Q96NT5 459 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 CAMKK2Q96RR4 588 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 GNL3LQ9NVN8 582 aaKnown RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 RLIMQ9NVW2 624 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 DLL3Q9NYJ7 618 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 SERTAD3Q9UJW9 196 aa3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 PPRC1Q5VV67 1664 aaKnown RBP3.23□□□□□ -1.89
SUB1P3-201ENST00000564581 ZNF804BA4D1E1 1349 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 CHEK2O96017 543 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 ITGB6P18564 788 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 EPHB2P29323 1055 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 HK3P52790 923 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 LILRA4P59901 499 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 KRTAP10-9P60411 292 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 KRT85P78386 507 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 TCF15Q12870 199 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 TREML2Q5T2D2 321 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 PRAMEF17Q5VTA0 474 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 KIAA1614Q5VZ46 1190 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 C11orf87Q6NUJ2 197 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 CEP85Q6P2H3 762 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 SLC2A7Q6PXP3 512 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 NAPRTQ6XQN6 538 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 PRR18Q8N4B5 295 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 CPA6Q8N4T0 437 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 Q8N9P0 234 aaPredicted RBP3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 C9orf106Q8NAJ2 232 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 FANCBQ8NB91 859 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 ATRIPQ8WXE1 791 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 ZBTB9Q96C00 473 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 ASPSCR1Q9BZE9 553 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 LMBRD1Q9NUN5 540 aa3.22□□□□□ -1.89
SUB1P3-201ENST00000564581 POLHQ9Y253 713 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms