RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 LSAMPQ13449 338 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 HERC3Q15034 1050 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 USPL1Q5W0Q7 1092 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 RAB2BQ8WUD1 216 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 XAGE2Q96GT9 111 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 PLEKHA8Q96JA3 519 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 MYL10Q9BUA6 226 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SLC6A15Q9H2J7 730 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TBC1D7Q9P0N9 293 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 CRNNQ9UBG3 495 aaPredicted RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 PCDHGA10Q9Y5H3 936 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 JCADQ9P266 1359 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TRIM49BA6NDI0 452 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 ZBTB11O95625 1053 aaPredicted RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 CALB1P05937 261 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 VAC14Q08AM6 782 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 WDR45BQ5MNZ6 344 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 KLHL32Q96NJ5 620 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 CITED4Q96RK1 184 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 C17orf80Q9BSJ5 609 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SNX13Q9Y5W8 968 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 NPR1P16066 1061 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 COILP38432 576 aaPredicted RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 KLHDC10Q6PID8 442 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SATL1Q86VE3 508 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 GPIHBP1Q8IV16 184 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 HM13Q8TCT9 377 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 VPS33BQ9H267 617 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 DHX36Q9H2U1 1008 aaKnown RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 CD109Q6YHK3 1445 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 USP32Q8NFA0 1604 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 CACNA1FO60840 1977 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 BTNL10A8MVZ5 291 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 GP5P40197 560 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TP53BP2Q13625 1128 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SF3B3Q15393 1217 aaKnown RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 ZNF420Q8TAQ5 688 aaPredicted RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 BDH2Q9BUT1 245 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 EMILIN2Q9BXX0 1053 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 REXO4Q9GZR2 422 aaKnown RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 EIF2AK2P19525 551 aaKnown RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 CDC25AP30304 524 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 COPZ1P61923 177 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SMU1Q2TAY7 513 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TTC23LQ6PF05 361 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SFRP1Q8N474 314 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SH3KBP1Q96B97 665 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TMEM109Q9BVC6 243 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 PHF20Q9BVI0 1012 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 ETNK2Q9NVF9 386 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 QRICH2Q9H0J4 1663 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 MYH10P35580 1976 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SEC24AO95486 1093 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 NAMPTP43490 491 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TAP1Q03518 808 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TPTE2Q6XPS3 522 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 GATAD2AQ86YP4 633 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 RFX6Q8HWS3 928 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 CCNJLQ8IV13 435 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 DEFB107AQ8IZN7 70 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 KBTBD8Q8NFY9 601 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 USP20Q9Y2K6 914 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 PPP1R3GB7ZBB8 358 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 MYCP01106 439 aaPredicted RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 PRIM2P49643 509 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 ITGA8P53708 1063 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 C11orf63Q6NUN7 778 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 MZT2BQ6NZ67 158 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 DARS2Q6PI48 645 aaKnown RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 CYP4V2Q6ZWL3 525 aaPredicted RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 C16orf62Q7Z3J2 963 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TMA16Q96EY4 203 aaKnown RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 PCDH12Q9NPG4 1184 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 TPRKBQ9Y3C4 175 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 ARHGEF35A5YM69 484 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 H7C0C1 242 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 AGPSO00116 658 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 AIM2O14862 343 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 HLA-DOAP06340 250 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 ENO3P13929 434 aaPredicted RBP6.51□□□□□ -1.37
CLK3-212ENST00000563418 TECP42680 631 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 ATP5OP48047 213 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 PSMC6P62333 389 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 NAALADL2Q58DX5 795 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SLC30A5Q8TAD4 765 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 VAT1LQ9HCJ6 419 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 AGPAT5Q9NUQ2 364 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 SERPINB13Q9UIV8 391 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 CPDO75976 1380 aa6.51□□□□□ -1.37
CLK3-212ENST00000563418 LRRC7Q96NW7 1537 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 GPR75-ASB3A0A0A6YYF3 556 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 UFL1O94874 794 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 NTRK1P04629 796 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 ATP2B4P23634 1241 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 TRAP1Q12931 704 aaKnown RBP6.5□□□□□ -1.37
CLK3-212ENST00000563418 DDB1Q16531 1140 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 TRIM72Q6ZMU5 477 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 ATG14Q6ZNE5 492 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 NCLNQ969V3 563 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms