RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 PON2Q15165 354 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 RSPO4Q2I0M5 234 aaPredicted RBP22.55■■□□□ 1.2
CHD9-208ENST00000563410 DGKKQ5KSL6 1271 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 SYCP3Q8IZU3 236 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 GPR161Q8N6U8 529 aaKnown RBP22.55■■□□□ 1.2
CHD9-208ENST00000563410 CELF5Q8N6W0 485 aaKnown RBP22.55■■□□□ 1.2
CHD9-208ENST00000563410 LRRC52Q8N7C0 313 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 CACTINQ8WUQ7 758 aaKnown RBP22.55■■□□□ 1.2
CHD9-208ENST00000563410 LEO1Q8WVC0 666 aaPredicted RBP22.55■■□□□ 1.2
CHD9-208ENST00000563410 PKMYT1Q99640 499 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 ACBD6Q9BR61 282 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 PI4K2AQ9BTU6 479 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 PCIF1Q9H4Z3 704 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 PDE11AQ9HCR9 933 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 C2orf42Q9NWW7 574 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 SIX4Q9UIU6 781 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 SPAG17Q6Q759 2223 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 MED19A0JLT2 244 aaPredicted RBP22.54■■□□□ 1.2
CHD9-208ENST00000563410 K7ESF4 209 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 EXTL3O43909 919 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 PAPSS2O95340 614 aaPredicted RBP22.54■■□□□ 1.2
CHD9-208ENST00000563410 NASPP49321 788 aaPredicted RBP22.54■■□□□ 1.2
CHD9-208ENST00000563410 CCINQ13939 588 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 SDHAF4Q5VUM1 108 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 OSTM1Q86WC4 334 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 CSGALNACT2Q8N6G5 542 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 PDILTQ8N807 584 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 GLIS3Q8NEA6 775 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 SECISBP2LQ93073 1101 aaKnown RBP22.54■■□□□ 1.2
CHD9-208ENST00000563410 GDAP2Q9NXN4 497 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 DDX43Q9NXZ2 648 aaKnown RBP22.54■■□□□ 1.2
CHD9-208ENST00000563410 ZMYM5Q9UJ78 669 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 ITGA11Q9UKX5 1188 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 CCL26Q9Y258 94 aa22.54■■□□□ 1.2
CHD9-208ENST00000563410 SDK1Q7Z5N4 2213 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 TULP1O00294 542 aaPredicted RBP22.53■■□□□ 1.2
CHD9-208ENST00000563410 HUS1O60921 280 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 PRPF40AO75400 957 aaKnown RBP22.53■■□□□ 1.2
CHD9-208ENST00000563410 ACAT1P24752 427 aaKnown RBP22.53■■□□□ 1.2
CHD9-208ENST00000563410 BFSP1Q12934 665 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 NFE2Q16621 373 aaPredicted RBP22.53■■□□□ 1.2
CHD9-208ENST00000563410 CCDC142Q17RM4 750 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 INTS6LQ5JSJ4 861 aaKnown RBP22.53■■□□□ 1.2
CHD9-208ENST00000563410 TMEM86AQ8N2M4 240 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 MAB21L3Q8N8X9 362 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 USP13Q92995 863 aaPredicted RBP22.53■■□□□ 1.2
CHD9-208ENST00000563410 FAM83CQ9BQN1 747 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 MTMR12Q9C0I1 747 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 ZSCAN16Q9H4T2 348 aaPredicted RBP22.53■■□□□ 1.2
CHD9-208ENST00000563410 TMEM206Q9H813 350 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 PARD6AQ9NPB6 346 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 GKN1Q9NS71 199 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 FOXD4L1Q9NU39 408 aa22.53■■□□□ 1.2
CHD9-208ENST00000563410 CHURC1-FNTBB4DL54 471 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 HCRTO43612 131 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 CSH1P0DML2 217 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 CSH2P0DML3 217 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 CYP2F1P24903 491 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 HOXC13P31276 330 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 FNTBP49356 437 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 LPAL2Q16609 132 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 DDR2Q16832 855 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 ITPRIPL2Q3MIP1 535 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 LMBRD2Q68DH5 695 aaPredicted RBP22.52■■□□□ 1.2
CHD9-208ENST00000563410 TXNDC8Q6A555 127 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 GPD1LQ8N335 351 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 LINC00301Q8NCQ3 95 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 RIN3Q8TB24 985 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 CHFRQ96EP1 664 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 HPS4Q9NQG7 708 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 THG1LQ9NWX6 298 aaKnown RBP22.52■■□□□ 1.2
CHD9-208ENST00000563410 GTF3C4Q9UKN8 822 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 MAGED2Q9UNF1 606 aaPredicted RBP22.52■■□□□ 1.2
CHD9-208ENST00000563410 SNX9Q9Y5X1 595 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 EML5Q05BV3 1969 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 PTPRJQ12913 1337 aa22.52■■□□□ 1.2
CHD9-208ENST00000563410 HELZP42694 1942 aaKnown RBP22.51■■□□□ 1.19
CHD9-208ENST00000563410 GABRDO14764 452 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 HRO43593 1189 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 STX6O43752 255 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 TADA3O75528 432 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 KRT19P08727 400 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 DDX6P26196 483 aaKnown RBP eCLIP22.51■■□□□ 1.19
CHD9-208ENST00000563410 AVPR1AP37288 418 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 RBP5P82980 135 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 MYL7Q01449 175 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 E2F4Q16254 413 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 CCDC65Q8IXS2 484 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 TOP6BLQ8N6T0 577 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 NOC3LQ8WTT2 800 aaKnown RBP22.51■■□□□ 1.19
CHD9-208ENST00000563410 HPS3Q969F9 1004 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 ABCB6Q9NP58 842 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 TDP1Q9NUW8 608 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 GMEB2Q9UKD1 530 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 MYO16Q9Y6X6 1858 aa22.51■■□□□ 1.19
CHD9-208ENST00000563410 OTOL1A6NHN0 477 aaPredicted RBP22.5■■□□□ 1.19
CHD9-208ENST00000563410 SOBPA7XYQ1 873 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 NOL4O94818 638 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 TMEM191BP0C7N4 346 aa22.5■■□□□ 1.19
CHD9-208ENST00000563410 HOXD13P35453 343 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms