RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 A0A0B4J269 797 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 LGR5O75473 907 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 LCP1P13796 627 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 COPS2P61201 443 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 BST2Q10589 180 aaKnown RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 FSTL1Q12841 308 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 NNTQ13423 1086 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 CCDC13Q8IYE1 715 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 DNAAF3Q8N9W5 541 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 GSDMBQ8TAX9 411 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 RSPH1Q8WYR4 309 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 SNTG2Q9NY99 539 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 LSM7Q9UK45 103 aaKnown RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 HPCAL4Q9UM19 191 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 SHANK3Q9BYB0 1731 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 CES2O00748 559 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 PDGFRBP09619 1106 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 YBX3P16989 372 aaKnown RBP eCLIP7.92□□□□□ -1.14
TCF4-216ENST00000562680 PPARGP37231 505 aaPredicted RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 SULT1E1P49888 294 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 ASPHQ12797 758 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 ZNF268Q14587 947 aaPredicted RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 ACAP1Q15027 740 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 C6orf118Q5T5N4 469 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 RWDD4Q6NW29 188 aaKnown RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 CCDC137Q6PK04 289 aaKnown RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 OLFML1Q6UWY5 402 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 CXCL17Q6UXB2 119 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 VPS52Q8N1B4 723 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 MCEEQ96PE7 176 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 PPCSQ9HAB8 311 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 KLHL8Q9P2G9 620 aaPredicted RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 TPX2Q9ULW0 747 aaKnown RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 COL5A3P25940 1745 aaPredicted RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 FAM170AA1A519 330 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 LACTBL1A8MY62 500 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 RNF40O75150 1001 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 SGPL1O95470 568 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 COMTP21964 271 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 STX2P32856 288 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 RPL9P32969 192 aaKnown RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 FNTAP49354 379 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 ZNF135P52742 658 aaPredicted RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 SPIRE1Q08AE8 756 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 ZCWPW2Q504Y3 356 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 EPM2AIP1Q7L775 607 aaPredicted RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 ZNF571Q7Z3V5 609 aaPredicted RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 MMGT1Q8N4V1 131 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 SNF8Q96H20 258 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 TBCBQ99426 244 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 OSBPL8Q9BZF1 889 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.92□□□□□ -1.14
TCF4-216ENST00000562680 DPP7Q9UHL4 492 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 GIT1Q9Y2X7 761 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 CNTNAP2Q9UHC6 1331 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 NDUFAB1O14561 156 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 NCK2O43639 380 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 TPI1P60174 286 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 BEX3Q00994 111 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 DEUP1Q05D60 604 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 GRB14Q14449 540 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 MIIPQ5JXC2 388 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 SHC3Q92529 594 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 KRT35Q92764 455 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 SMC6Q96SB8 1091 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 ZSWIM1Q9BR11 485 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 CNPY3Q9BT09 278 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 MAGEB5Q9BZ81 275 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 L2HGDHQ9H9P8 463 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 FAM49BQ9NUQ9 324 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 ATP8A1Q9Y2Q0 1164 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 CDY2AQ9Y6F7 541 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 MOXD2PA6NHM9 499 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 B4GALT4O60513 344 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 E2F6O75461 281 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 RECQL4O94761 1208 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 XPAP23025 273 aaPredicted RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 MSH2P43246 934 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 PDK2Q15119 407 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 SEZ6Q53EL9 994 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 PAPD7Q5XG87 772 aaKnown RBP7.92□□□□□ -1.14
TCF4-216ENST00000562680 PYROXD1Q8WU10 500 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 FAF2Q96CS3 445 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 CYFIP2Q96F07 1278 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 KLK14Q9P0G3 267 aa7.92□□□□□ -1.14
TCF4-216ENST00000562680 PMM2O15305 246 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 EFCAB14O75071 495 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ATP2C2O75185 946 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 PROSCO94903 275 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 GHRP10912 638 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 DARSP14868 501 aaKnown RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 PAMP19021 973 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 CUL3Q13618 768 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 GLRA4Q5JXX5 417 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 GANQ9H2C0 597 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 PFDN4Q9NQP4 134 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 PDGFCQ9NRA1 345 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 AKAP11Q9UKA4 1901 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 AP5Z1O43299 807 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms