RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 LINC00523Q86TU6 105 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 ZNF614Q8N883 585 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 PI4K2AQ9BTU6 479 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 PHF20Q9BVI0 1012 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 ASCC2Q9H1I8 757 aaPredicted RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 GOLPH3Q9H4A6 298 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 BLOC1S6Q9UL45 172 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 JCADQ9P266 1359 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 UBE2Q2LH0YL09 131 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 M0QYT0 321 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 CST8O60676 142 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 URODP06132 367 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 SBK1Q52WX2 424 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 FBXO32Q969P5 355 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 EME1Q96AY2 570 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 NMRK1Q9NWW6 199 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 DDIT4Q9NX09 232 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.71□□□□□ -0.54
RPAP1-204ENST00000562303 V9GYQ6 96 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 MAP3K4Q9Y6R4 1608 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 RASSF9O75901 435 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 ACADMP11310 421 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 DNAL1Q4LDG9 190 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 ZNF438Q7Z4V0 828 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 CDR2LQ86X02 465 aaPredicted RBP11.71□□□□□ -0.54
RPAP1-204ENST00000562303 PHACTR4Q8IZ21 702 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 TAAR1Q96RJ0 339 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 RIT2Q99578 217 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 TARS2Q9BW92 718 aaKnown RBP11.71□□□□□ -0.54
RPAP1-204ENST00000562303 OSBPL8Q9BZF1 889 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 ARL2BPQ9Y2Y0 163 aa11.71□□□□□ -0.54
RPAP1-204ENST00000562303 ADGBQ8N7X0 1667 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 HOXA2O43364 376 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 SYNCRIPO60506 623 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 HNRNPH2P55795 449 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ACTN3Q08043 901 aaPredicted RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 MIB1Q86YT6 1006 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 LRRC1Q9BTT6 524 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 AP1G2O75843 785 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 DGKIO75912 1065 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 SNRPAP09012 282 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 BFSP2Q13515 415 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 IYDQ6PHW0 289 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 LAYNQ6UX15 382 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 C3orf62Q6ZUJ4 267 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 KCNK16Q96T55 309 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 KCNH7Q9NS40 1196 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 DBR1Q9UK59 544 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 EIF3DO15371 548 aaKnown RBP eCLIP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 SPAG6O75602 509 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 B3GAT3O94766 335 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ERVK-10P10266 1014 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 GPC1P35052 558 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 MAGEA9P43362 315 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 LRRC36Q1X8D7 754 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 AASDHQ4L235 1098 aaPredicted RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 XRRA1Q6P2D8 792 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 NT5DC4Q86YG4 428 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 DTX3LQ8TDB6 740 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 CMTM5Q96DZ9 223 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 NFKBIZQ9BYH8 718 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 MPP6Q9NZW5 540 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ZNF185O15231 689 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ZC3H11AO75152 810 aaKnown RBP eCLIP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 CDH16O75309 829 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 PDHBP11177 359 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ANXA11P50995 505 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 SNRPFP62306 86 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 PLCL1Q15111 1095 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 CLEC16AQ2KHT3 1053 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ALFQ53S48 1182 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 PLEKHH3Q7Z736 793 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 FAM71DQ8N9W8 422 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 RIN2Q8WYP3 895 aaPredicted RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 THAP11Q96EK4 314 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 SCN3BQ9NY72 215 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 GTF2A1LQ9UNN4 478 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 MYMKA6NI61 221 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 WBP4O75554 376 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 ACO1P21399 889 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 GEMP55040 296 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 GUCY1A3Q02108 690 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 SMAD5Q99717 465 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 RPS6KB2Q9UBS0 482 aa11.7□□□□□ -0.54
RPAP1-204ENST00000562303 EIF3LQ9Y262 564 aaKnown RBP11.7□□□□□ -0.54
RPAP1-204ENST00000562303 TOMM70O94826 608 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 KLHL2O95198 593 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 CHI3L1P36222 383 aaPredicted RBP11.69□□□□□ -0.54
RPAP1-204ENST00000562303 MTM1Q13496 603 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 ZNF284Q2VY69 593 aa11.69□□□□□ -0.54
RPAP1-204ENST00000562303 LVRNQ6Q4G3 990 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms