RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 TRIAP1O43715 76 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 NARSO43776 548 aaKnown RBP6.81□□□□□ -1.32
DENND4A-204ENST00000562028 MYL3P08590 195 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 TNFRSF1AP19438 455 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 KLRC1P26715 233 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 ALDH5A1P51649 535 aaPredicted RBP6.81□□□□□ -1.32
DENND4A-204ENST00000562028 ZNF134P52741 427 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 SATB1Q01826 763 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 ZNF543Q08ER8 600 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 PTPAQ15257 358 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 ABHD17BQ5VST6 288 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 DCAF12L1Q5VU92 463 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 CRIP3Q6Q6R5 217 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 GPR149Q86SP6 731 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 OR56A3Q8NH54 315 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 NELL2Q99435 816 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 MLST8Q9BVC4 326 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 BRIP1Q9BX63 1249 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 MS4A7Q9GZW8 240 aaPredicted RBP6.81□□□□□ -1.32
DENND4A-204ENST00000562028 SERHL2Q9H4I8 314 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 MMRN2Q9H8L6 949 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 TBCCD1Q9NVR7 557 aa6.81□□□□□ -1.32
DENND4A-204ENST00000562028 A0A0B4J269 797 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 NPIPB8E9PQR5 432 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 F8W8V4 182 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 KPNA5O15131 536 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 IFIT2P09913 472 aaKnown RBP6.8□□□□□ -1.32
DENND4A-204ENST00000562028 EGR2P11161 476 aaPredicted RBP6.8□□□□□ -1.32
DENND4A-204ENST00000562028 GATA3P23771 443 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 LRPAP1P30533 357 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 PXNP49023 591 aaPredicted RBP6.8□□□□□ -1.32
DENND4A-204ENST00000562028 BLOC1S1P78537 153 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 TUBB3Q13509 450 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 PUM1Q14671 1186 aaKnown RBP eCLIP6.8□□□□□ -1.32
DENND4A-204ENST00000562028 LONRF1Q17RB8 773 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 SFRP4Q6FHJ7 346 aaPredicted RBP6.8□□□□□ -1.32
DENND4A-204ENST00000562028 PARD3BQ8TEW8 1205 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 SPSB4Q96A44 273 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 TNIP3Q96KP6 325 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 MYD88Q99836 296 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 XPNPEP3Q9NQH7 507 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 ZSCAN32Q9NX65 697 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 ANKFY1Q9P2R3 1169 aa6.8□□□□□ -1.32
DENND4A-204ENST00000562028 ZNF202O95125 648 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 PARP1P09874 1014 aaKnown RBP6.79□□□□□ -1.32
DENND4A-204ENST00000562028 SRGNP10124 158 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 LILRA4P59901 499 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 MGAT5BQ3V5L5 792 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 TMEM108Q6UXF1 575 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 SDR16C5Q8N3Y7 309 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 LNX2Q8N448 690 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 FAM109AQ8N4B1 249 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 ASB10Q8WXI3 467 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 PTCD3Q96EY7 689 aaKnown RBP6.79□□□□□ -1.32
DENND4A-204ENST00000562028 SLC39A13Q96H72 371 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 ELAC2Q9BQ52 826 aaKnown RBP6.79□□□□□ -1.32
DENND4A-204ENST00000562028 PTDSS2Q9BVG9 487 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 COLEC11Q9BWP8 271 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 WDR11Q9BZH6 1224 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 SERHLQ9NQF3 203 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 STARD7Q9NQZ5 370 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 PADI4Q9UM07 663 aa6.79□□□□□ -1.32
DENND4A-204ENST00000562028 POM121BA6NF01 834 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 RASA4BC9J798 803 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 RASA4O43374 803 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 ITGAMP11215 1152 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 TSHRP16473 764 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 CD6P30203 668 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 PPIFP30405 207 aaKnown RBP6.78□□□□□ -1.32
DENND4A-204ENST00000562028 MCM7P33993 719 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 ZEB1P37275 1124 aaPredicted RBP6.78□□□□□ -1.32
DENND4A-204ENST00000562028 HTRA4P83105 476 aaPredicted RBP6.78□□□□□ -1.32
DENND4A-204ENST00000562028 TAP1Q03518 808 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 PLA1AQ53H76 456 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 RBM20Q5T481 1227 aaKnown RBP6.78□□□□□ -1.32
DENND4A-204ENST00000562028 IGFL4Q6B9Z1 124 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 SAMD3Q8N6K7 520 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 IPCEF1Q8WWN9 437 aaPredicted RBP6.78□□□□□ -1.32
DENND4A-204ENST00000562028 RAPGEF4Q8WZA2 1011 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 GJA10Q969M2 543 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 SNX22Q96L94 193 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 CCDC138Q96M89 665 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 CHST8Q9H2A9 424 aa6.78□□□□□ -1.32
DENND4A-204ENST00000562028 TESQ9UGI8 421 aaKnown RBP6.78□□□□□ -1.32
DENND4A-204ENST00000562028 CCP110O43303 1012 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 RASSF9O75901 435 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 MT-ND5P03915 603 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 ANXA2P07355 339 aaKnown RBP6.77□□□□□ -1.33
DENND4A-204ENST00000562028 TXNP10599 105 aaKnown RBP6.77□□□□□ -1.33
DENND4A-204ENST00000562028 IL1R1P14778 569 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 STT3AP46977 705 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 INSCQ1MX18 579 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 UNC13DQ70J99 1090 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 YAF2Q8IY57 180 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 RNF152Q8N8N0 203 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 ATP11CQ8NB49 1132 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 SLC30A5Q8TAD4 765 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 SSH3Q8TE77 659 aa6.77□□□□□ -1.33
DENND4A-204ENST00000562028 PPP1R9BQ96SB3 815 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms