RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
SPG7-205ENST00000561945 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
SPG7-205ENST00000561945 HPS4Q9NQG7 708 aa15.67■□□□□ 0.1
SPG7-205ENST00000561945 TMLHEQ9NVH6 421 aa15.67■□□□□ 0.1
SPG7-205ENST00000561945 C2orf42Q9NWW7 574 aa15.67■□□□□ 0.1
SPG7-205ENST00000561945 RAB23Q9ULC3 237 aa15.67■□□□□ 0.1
SPG7-205ENST00000561945 L1RE1Q9UN81 338 aa15.67■□□□□ 0.1
SPG7-205ENST00000561945 ANAPC1Q9H1A4 1944 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 ZNF638Q14966 1978 aaKnown RBP15.66■□□□□ 0.1
SPG7-205ENST00000561945 CHURC1-FNTBB4DL54 471 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 TRDMT1O14717 391 aaKnown RBP15.66■□□□□ 0.1
SPG7-205ENST00000561945 GABRDO14764 452 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 FOXD2O60548 495 aaPredicted RBP15.66■□□□□ 0.1
SPG7-205ENST00000561945 NOL4O94818 638 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 CSH1P0DML2 217 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 CSH2P0DML3 217 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 PDCP20941 246 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 HOXC13P31276 330 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 FNTBP49356 437 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 CASP5P51878 434 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 SPEM2Q0P670 501 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 RESTQ13127 1097 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 SIM2Q14190 667 aaPredicted RBP15.66■□□□□ 0.1
SPG7-205ENST00000561945 CSRP2Q16527 193 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 CFAP221Q4G0U5 840 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 RRAGBQ5VZM2 374 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 SV2BQ7L1I2 683 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 MON1AQ86VX9 555 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 GIPC2Q8TF65 315 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 USP13Q92995 863 aaPredicted RBP15.66■□□□□ 0.1
SPG7-205ENST00000561945 MRPL44Q9H9J2 332 aaKnown RBP15.66■□□□□ 0.1
SPG7-205ENST00000561945 TDP1Q9NUW8 608 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 ITGA11Q9UKX5 1188 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 CDV3Q9UKY7 258 aaKnown RBP15.66■□□□□ 0.1
SPG7-205ENST00000561945 CCL26Q9Y258 94 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 PCDHB13Q9Y5F0 798 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 MAP1BP46821 2468 aaKnown RBP15.66■□□□□ 0.1
SPG7-205ENST00000561945 EML5Q05BV3 1969 aa15.66■□□□□ 0.1
SPG7-205ENST00000561945 PTPRDP23468 1912 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 HELZP42694 1942 aaKnown RBP15.65■□□□□ 0.1
SPG7-205ENST00000561945 OTOL1A6NHN0 477 aaPredicted RBP15.65■□□□□ 0.1
SPG7-205ENST00000561945 ITGB3P05106 788 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 POLR2BP30876 1174 aaKnown RBP15.65■□□□□ 0.1
SPG7-205ENST00000561945 TSPY1Q01534 308 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 RUNX3Q13761 415 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 INTS6LQ5JSJ4 861 aaKnown RBP15.65■□□□□ 0.1
SPG7-205ENST00000561945 FSTL4Q6MZW2 842 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 TOP6BLQ8N6T0 577 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 ZSWIM2Q8NEG5 633 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 RIN3Q8TB24 985 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 NETO1Q8TDF5 533 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 CACTINQ8WUQ7 758 aaKnown RBP15.65■□□□□ 0.1
SPG7-205ENST00000561945 FAM213AQ9BRX8 229 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 SMG9Q9H0W8 520 aaKnown RBP15.65■□□□□ 0.1
SPG7-205ENST00000561945 GKN1Q9NS71 199 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 ABI2Q9NYB9 513 aaPredicted RBP15.65■□□□□ 0.1
SPG7-205ENST00000561945 USP18Q9UMW8 372 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 MYO16Q9Y6X6 1858 aa15.65■□□□□ 0.1
SPG7-205ENST00000561945 SLC30A4O14863 429 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 KIAA0391O15091 583 aaKnown RBP15.64■□□□□ 0.09
SPG7-205ENST00000561945 EXTL3O43909 919 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 TADA3O75528 432 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 TCF3P15923 654 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 AVPR1AP37288 418 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 SCARA3Q6AZY7 606 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 FAM171BQ6P995 826 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 CCDC73Q6ZRK6 1079 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 DPH6Q7L8W6 267 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 MAB21L3Q8N8X9 362 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 TTC8Q8TAM2 541 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 FUBP3Q96I24 572 aaKnown RBP eCLIP15.64■□□□□ 0.09
SPG7-205ENST00000561945 CLIC6Q96NY7 704 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 TMEM206Q9H813 350 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 SEMA4GQ9NTN9 838 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 DDX43Q9NXZ2 648 aaKnown RBP15.64■□□□□ 0.09
SPG7-205ENST00000561945 RBAKQ9NYW8 714 aaPredicted RBP15.64■□□□□ 0.09
SPG7-205ENST00000561945 UXTQ9UBK9 157 aaPredicted RBP15.64■□□□□ 0.09
SPG7-205ENST00000561945 SIX4Q9UIU6 781 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 AGAP1Q9UPQ3 857 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 SDK1Q7Z5N4 2213 aa15.64■□□□□ 0.09
SPG7-205ENST00000561945 RALGAPA1Q6GYQ0 2036 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 A0A087X0B3 334 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 VPS37CA5D8V6 355 aaPredicted RBP15.63■□□□□ 0.09
SPG7-205ENST00000561945 HUS1O60921 280 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 PRPF40AO75400 957 aaKnown RBP15.63■□□□□ 0.09
SPG7-205ENST00000561945 AKAP3O75969 853 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 GCNT3O95395 438 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 SYT1P21579 422 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 TXLNAP40222 546 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 LHX1P48742 406 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 GPR15P49685 360 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 RPL10AP62906 217 aaKnown RBP15.63■□□□□ 0.09
SPG7-205ENST00000561945 TFAMQ00059 246 aaKnown RBP15.63■□□□□ 0.09
SPG7-205ENST00000561945 MYL7Q01449 175 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 SRSF5Q13243 272 aaKnown RBP15.63■□□□□ 0.09
SPG7-205ENST00000561945 SLC39A14Q15043 492 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 PDGFRLQ15198 375 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 TAF12Q16514 161 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 LPAL2Q16609 132 aa15.63■□□□□ 0.09
SPG7-205ENST00000561945 TXNDC8Q6A555 127 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms