RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 MKNK1Q9BUB5 465 aa27.28■■□□□ 1.96
MSLN-203ENST00000561896 ATXN3LQ9H3M9 355 aa27.28■■□□□ 1.96
MSLN-203ENST00000561896 BRD9Q9H8M2 597 aa27.28■■□□□ 1.96
MSLN-203ENST00000561896 IL21Q9HBE4 155 aa27.28■■□□□ 1.96
MSLN-203ENST00000561896 DMAC2Q9NW81 257 aa27.28■■□□□ 1.96
MSLN-203ENST00000561896 CACNA1IQ9P0X4 2223 aa27.28■■□□□ 1.96
MSLN-203ENST00000561896 ZFHX2Q9C0A1 2572 aaPredicted RBP27.27■■□□□ 1.96
MSLN-203ENST00000561896 PDXKO00764 312 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 STAU1O95793 577 aaKnown RBP27.27■■□□□ 1.96
MSLN-203ENST00000561896 NBL1P41271 181 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 VIPR2P41587 438 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 AP3M2P53677 418 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 TAF12Q16514 161 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 OSTM1Q86WC4 334 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 GCNAQ96QF7 691 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 FOXQ1Q9C009 403 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 KCTD10Q9H3F6 313 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 OBP2AQ9NY56 170 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 USP34Q70CQ2 3546 aa27.27■■□□□ 1.96
MSLN-203ENST00000561896 SOBPA7XYQ1 873 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 KIF20AO95235 890 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 RPN1P04843 607 aaKnown RBP27.26■■□□□ 1.95
MSLN-203ENST00000561896 MAGEA9P43362 315 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 MLLT6P55198 1093 aaPredicted RBP27.26■■□□□ 1.95
MSLN-203ENST00000561896 RPL10AP62906 217 aaKnown RBP27.26■■□□□ 1.95
MSLN-203ENST00000561896 CLDN10P78369 228 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 GRM2Q14416 872 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 ANGPT1Q15389 498 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 FAM171BQ6P995 826 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 ARID3BQ8IVW6 561 aaPredicted RBP27.26■■□□□ 1.95
MSLN-203ENST00000561896 KBTBD7Q8WVZ9 684 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 CCDC47Q96A33 483 aaKnown RBP27.26■■□□□ 1.95
MSLN-203ENST00000561896 GZF1Q9H116 711 aaPredicted RBP27.26■■□□□ 1.95
MSLN-203ENST00000561896 TASP1Q9H6P5 420 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 GTF3C4Q9UKN8 822 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 CDH9Q9ULB4 789 aa27.26■■□□□ 1.95
MSLN-203ENST00000561896 MRPS17Q9Y2R5 130 aaKnown RBP27.26■■□□□ 1.95
MSLN-203ENST00000561896 MYO15AQ9UKN7 3530 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 COL4A2P08572 1712 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 VPS13AQ96RL7 3174 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 HEPACAM2A8MVW5 462 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 CST3P01034 146 aaPredicted RBP27.25■■□□□ 1.95
MSLN-203ENST00000561896 DCNP07585 359 aaKnown RBP27.25■■□□□ 1.95
MSLN-203ENST00000561896 CSH1P0DML2 217 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 CSH2P0DML3 217 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 WARSP23381 471 aaKnown RBP27.25■■□□□ 1.95
MSLN-203ENST00000561896 ACAT1P24752 427 aaKnown RBP27.25■■□□□ 1.95
MSLN-203ENST00000561896 ATICP31939 592 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 FCHO2Q0JRZ9 810 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 MAPRE1Q15691 268 aaKnown RBP27.25■■□□□ 1.95
MSLN-203ENST00000561896 ZNF852Q6ZMS4 543 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 FSIP1Q8NA03 581 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 PI4K2AQ9BTU6 479 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 LTB4R2Q9NPC1 389 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 FAM86C1Q9NVL1 165 aa27.25■■□□□ 1.95
MSLN-203ENST00000561896 TICRRQ7Z2Z1 1910 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 RIF1Q5UIP0 2472 aaKnown RBP27.24■■□□□ 1.95
MSLN-203ENST00000561896 MAN2B1O00754 1011 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 ZNF263O14978 683 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 TACC1O75410 805 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 RHOBTB3O94955 611 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 GLULP15104 373 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 HMGA1P17096 107 aaKnown RBP27.24■■□□□ 1.95
MSLN-203ENST00000561896 GDI1P31150 447 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 STXBP5Q5T5C0 1151 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 GPR158Q5T848 1215 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 KRBA2Q6ZNG9 492 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 C4orf50Q6ZRC1 276 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 TPRG1Q6ZUI0 275 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 GIPC2Q8TF65 315 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 ZNF516Q92618 1163 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 CCDC34Q96HJ3 373 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 CEP295NLQ96MC4 621 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 HEBP1Q9NRV9 189 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 PTPRDP23468 1912 aa27.24■■□□□ 1.95
MSLN-203ENST00000561896 OBSL1O75147 1896 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 CHADO15335 359 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 NCAM2O15394 837 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 DDX6P26196 483 aaKnown RBP eCLIP27.23■■□□□ 1.95
MSLN-203ENST00000561896 MAGEA11P43364 429 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 NUCB2P80303 420 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 DPYDQ12882 1025 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 SPATA2LQ8IUW3 424 aaPredicted RBP27.23■■□□□ 1.95
MSLN-203ENST00000561896 PARD3BQ8TEW8 1205 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 TRMT2BQ96GJ1 504 aaKnown RBP27.23■■□□□ 1.95
MSLN-203ENST00000561896 MYRFLQ96LU7 910 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 MMS19Q96T76 1030 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 SYT15Q9BQS2 421 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 BCO2Q9BYV7 579 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 VRTNQ9H8Y1 702 aa27.23■■□□□ 1.95
MSLN-203ENST00000561896 ZNF638Q14966 1978 aaKnown RBP27.22■■□□□ 1.95
MSLN-203ENST00000561896 MYBPHLA2RUH7 354 aa27.22■■□□□ 1.95
MSLN-203ENST00000561896 FAM170BA6NMN3 283 aa27.22■■□□□ 1.95
MSLN-203ENST00000561896 ARNTLO00327 626 aa27.22■■□□□ 1.95
MSLN-203ENST00000561896 ZNF202O95125 648 aa27.22■■□□□ 1.95
MSLN-203ENST00000561896 CYP2F1P24903 491 aa27.22■■□□□ 1.95
MSLN-203ENST00000561896 TRPC3Q13507 836 aa27.22■■□□□ 1.95
MSLN-203ENST00000561896 KCNB1Q14721 858 aa27.22■■□□□ 1.95
MSLN-203ENST00000561896 UBXN2BQ14CS0 331 aa27.22■■□□□ 1.95
MSLN-203ENST00000561896 C1orf210Q8IVY1 113 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms