RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 SCARA5Q6ZMJ2 495 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 SLC9A9Q8IVB4 645 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 CCDC105Q8IYK2 499 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 THEM5Q8N1Q8 247 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 ELMOD1Q8N336 334 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 TOP6BLQ8N6T0 577 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 MYLPFQ96A32 169 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 ELSPBP1Q96BH3 223 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 EEF2KMTQ96G04 330 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 SYT15Q9BQS2 421 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 HEBP1Q9NRV9 189 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 HMGXB4Q9UGU5 601 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 HEPACAM2A8MVW5 462 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 ZNF197O14709 1029 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 GADD45BO75293 160 aaPredicted RBP13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 MICAL2O94851 1124 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 C4BPAP04003 597 aaKnown RBP13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 PDGFRBP09619 1106 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 TRIM49P0CI25 452 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 TRIM49CP0CI26 452 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 WARSP23381 471 aaKnown RBP13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 CLCN5P51795 746 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 CDH8P55286 799 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 CLDN10P78369 228 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 SURF1Q15526 300 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 MLF2Q15773 248 aaPredicted RBP13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 GPR158Q5T848 1215 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 SPOPLQ6IQ16 392 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 FAM171BQ6P995 826 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 TMEM86AQ8N2M4 240 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 PJA1Q8NG27 643 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 SMARCD2Q92925 531 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 ZFYVE19Q96K21 471 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 FNBP1Q96RU3 617 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 ACBD6Q9BR61 282 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 DDX23Q9BUQ8 820 aaKnown RBP13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 KCNH6Q9H252 994 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 SLITRK6Q9H5Y7 841 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 TRPV4Q9HBA0 871 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 HSFX1Q9UBD0 423 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 PCDHB5Q9Y5E4 795 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 ATP6V1DQ9Y5K8 247 aa13.57□□□□□ -0.24
CHRNA3-208ENST00000561128 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 CLDN5O00501 218 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 PDXKO00764 312 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 AKAP3O75969 853 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 F11P03951 625 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 TARSP26639 723 aaKnown RBP13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 PMS1P54277 932 aaKnown RBP13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 NLRP12P59046 1061 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 STARD6P59095 220 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 USP46P62068 366 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 SNRPFP62306 86 aaKnown RBP13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 TSPY1Q01534 308 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 PSMD2Q13200 908 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 ORC1Q13415 861 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 KCNB1Q14721 858 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 SLC44A4Q53GD3 710 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 TPRG1Q6ZUI0 275 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 ALYREFQ86V81 257 aaKnown RBP13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 ARID3BQ8IVW6 561 aaPredicted RBP13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 DCP1BQ8IZD4 617 aaKnown RBP13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 DTWD2Q8NBA8 298 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 FAM200AQ8TCP9 573 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 MMS19Q96T76 1030 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 ATXN3LQ9H3M9 355 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 ZFP14Q9HCL3 533 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 NXF1Q9UBU9 619 aaKnown RBP13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 TRAF3IP3Q9Y228 551 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 CCL26Q9Y258 94 aa13.56□□□□□ -0.24
CHRNA3-208ENST00000561128 ANAPC1Q9H1A4 1944 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 SLC38A8A6NNN8 435 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 MYL1P05976 194 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 GDI1P31150 447 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 SOX9P48436 509 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 TUFMP49411 452 aaKnown RBP13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 PTPN5P54829 565 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 MYL7Q01449 175 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 PPP3CAQ08209 521 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 MYO1EQ12965 1108 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 WDR72Q3MJ13 1102 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 MDH1BQ5I0G3 518 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 ZNF687Q8N1G0 1237 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 LEMD2Q8NC56 503 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 C2orf15Q8WU43 125 aaKnown RBP13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 TMEM174Q8WUU8 243 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 PCED1BQ96HM7 432 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 SLC22A12Q96S37 553 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 SLC46A2Q9BY10 475 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 ZNF518BQ9C0D4 1074 aa13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 APOBEC3GQ9HC16 384 aaKnown RBP13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 MAGED2Q9UNF1 606 aaPredicted RBP13.55□□□□□ -0.24
CHRNA3-208ENST00000561128 ASB3Q9Y575 518 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms