RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 GCNAQ96QF7 691 aa11.58□□□□□ -0.56
TPM1-227ENST00000560970 MKNK1Q9BUB5 465 aa11.58□□□□□ -0.56
TPM1-227ENST00000560970 MSTO1Q9BUK6 570 aa11.58□□□□□ -0.56
TPM1-227ENST00000560970 RPF1Q9H9Y2 349 aaKnown RBP11.58□□□□□ -0.56
TPM1-227ENST00000560970 SLC39A2Q9NP94 309 aa11.58□□□□□ -0.56
TPM1-227ENST00000560970 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
TPM1-227ENST00000560970 HSFX1Q9UBD0 423 aa11.58□□□□□ -0.56
TPM1-227ENST00000560970 ASB3Q9Y575 518 aa11.58□□□□□ -0.56
TPM1-227ENST00000560970 TNRC6BQ9UPQ9 1833 aaKnown RBP11.58□□□□□ -0.56
TPM1-227ENST00000560970 SPTBN2O15020 2390 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 PLXND1Q9Y4D7 1925 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 MAP1BP46821 2468 aaKnown RBP11.57□□□□□ -0.56
TPM1-227ENST00000560970 ATG2BQ96BY7 2078 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 PVALEFA0A1B0GWK0 134 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 LACTBL1A8MY62 500 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 SPECC1L-ADORA2AF8WAN1 911 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 PPEF2O14830 753 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 EIF3DO15371 548 aaKnown RBP eCLIP11.57□□□□□ -0.56
TPM1-227ENST00000560970 NFICP08651 508 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 TGM1P22735 817 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 PAX3P23760 479 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 GABRR2P28476 465 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 CXCL12P48061 93 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 SOX9P48436 509 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 ACOT2P49753 483 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 ATXN1P54253 815 aaKnown RBP11.57□□□□□ -0.56
TPM1-227ENST00000560970 SPEM2Q0P670 501 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 DPYDQ12882 1025 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 GAS6Q14393 721 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 TMEM132DQ14C87 1099 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 VEPH1Q14D04 833 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 ARHGAP29Q52LW3 1261 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 ARHGAP15Q53QZ3 475 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 SPATA1Q5VX52 437 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 JADE1Q6IE81 842 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 CENPPQ6IPU0 288 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 CRELD2Q6UXH1 353 aaPredicted RBP11.57□□□□□ -0.56
TPM1-227ENST00000560970 Q6ZS52 159 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 RALGPS2Q86X27 583 aaPredicted RBP11.57□□□□□ -0.56
TPM1-227ENST00000560970 CD302Q8IX05 232 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 NELFCDQ8IXH7 590 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 OR10T2Q8NGX3 314 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 NETO1Q8TDF5 533 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 SCFD1Q8WVM8 642 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 POMGNT1Q8WZA1 660 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 SAAL1Q96ER3 474 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 CBWD1Q9BRT8 395 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 EXOC1Q9NV70 894 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 CPSF3Q9UKF6 684 aaKnown RBP11.57□□□□□ -0.56
TPM1-227ENST00000560970 AGO2Q9UKV8 859 aaKnown RBP11.57□□□□□ -0.56
TPM1-227ENST00000560970 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 UBE4BO95155 1302 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 ACACBO00763 2458 aa11.57□□□□□ -0.56
TPM1-227ENST00000560970 MYBPHLA2RUH7 354 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 DPYSL4O14531 572 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 TGFB1I1O43294 461 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 SOAT2O75908 522 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 PRAMEF12O95522 483 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 RPN1P04843 607 aaKnown RBP11.56□□□□□ -0.56
TPM1-227ENST00000560970 CYP11A1P05108 521 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 ADRB2P07550 413 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 RETP07949 1114 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 ATF6P18850 670 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 CDC25CP30307 473 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 CNR2P34972 360 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 LILRA4P59901 499 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 STK4Q13043 487 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 SIM2Q14190 667 aaPredicted RBP11.56□□□□□ -0.56
TPM1-227ENST00000560970 WDR44Q5JSH3 913 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 DGKKQ5KSL6 1271 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 GPR158Q5T848 1215 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 C9orf57Q5W0N0 161 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 ARMCX5Q6P1M9 558 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 TXNDC11Q6PKC3 985 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 GAREM2Q75VX8 874 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 LONP2Q86WA8 852 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 ARID3BQ8IVW6 561 aaPredicted RBP11.56□□□□□ -0.56
TPM1-227ENST00000560970 ATAD1Q8NBU5 361 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 ZNF507Q8TCN5 953 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 SENP8Q96LD8 212 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 TMEM209Q96SK2 561 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 SEPT5Q99719 369 aaPredicted RBP11.56□□□□□ -0.56
TPM1-227ENST00000560970 ATXN3LQ9H3M9 355 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 PCIF1Q9H4Z3 704 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 RBM12Q9NTZ6 932 aaKnown RBP11.56□□□□□ -0.56
TPM1-227ENST00000560970 DSEQ9UL01 958 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 EXOC7Q9UPT5 735 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 DERAQ9Y315 318 aa11.56□□□□□ -0.56
TPM1-227ENST00000560970 GOLGA8IPA6NC78 632 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 GOLGA6L4A6NEF3 574 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 GOLGA8JA6NMD2 632 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 CHURC1-FNTBB4DL54 471 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 K7ESF4 209 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 MYL1P05976 194 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 GARTP22102 1010 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 FNTBP49356 437 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 CYP4F8P98187 520 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 FAM160A1Q05DH4 1040 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 DMWDQ09019 674 aa11.55□□□□□ -0.56
TPM1-227ENST00000560970 PNOCQ13519 176 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms