RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 NUP58Q9BVL2 599 aa12.91□□□□□ -0.34
IRF9-211ENST00000560852 UBXN6Q9BZV1 441 aa12.91□□□□□ -0.34
IRF9-211ENST00000560852 TTYH3Q9C0H2 523 aa12.91□□□□□ -0.34
IRF9-211ENST00000560852 GPR88Q9GZN0 384 aa12.91□□□□□ -0.34
IRF9-211ENST00000560852 ELOVL4Q9GZR5 314 aa12.91□□□□□ -0.34
IRF9-211ENST00000560852 CSNK1G1Q9HCP0 422 aa12.91□□□□□ -0.34
IRF9-211ENST00000560852 DNAJC12Q9UKB3 198 aa12.91□□□□□ -0.34
IRF9-211ENST00000560852 VWA8A3KMH1 1905 aa12.91□□□□□ -0.34
IRF9-211ENST00000560852 A0A1W2PQJ5 194 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 MTMR11A4FU01 709 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 ZMYND10O75800 440 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 GLP2RO95838 553 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 TPM3P06753 285 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 RPL17P18621 184 aaKnown RBP12.9□□□□□ -0.34
IRF9-211ENST00000560852 TRIM21P19474 475 aaKnown RBP12.9□□□□□ -0.34
IRF9-211ENST00000560852 IGFBP4P22692 258 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 JAM2P57087 298 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 ARID5BQ14865 1188 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 STILQ15468 1287 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 C4orf50Q6ZRC1 276 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 CCDC149Q6ZUS6 474 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 PAQR9Q6ZVX9 377 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 FMNL3Q8IVF7 1028 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 KREMEN2Q8NCW0 462 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 KAT5Q92993 513 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 TWNKQ96RR1 684 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 TMEM209Q96SK2 561 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
IRF9-211ENST00000560852 CLEC1BQ9P126 229 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 GTF3C4Q9UKN8 822 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 COG5Q9UP83 839 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 PCDHB5Q9Y5E4 795 aa12.9□□□□□ -0.34
IRF9-211ENST00000560852 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
IRF9-211ENST00000560852 RNF225M0QZC1 329 aaPredicted RBP12.89□□□□□ -0.35
IRF9-211ENST00000560852 FOXN3O00409 490 aaPredicted RBP12.89□□□□□ -0.35
IRF9-211ENST00000560852 PER2O15055 1255 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 ATP2C2O75185 946 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 SRGAP2BP0DMP2 458 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 HAPLN1P10915 354 aaPredicted RBP12.89□□□□□ -0.35
IRF9-211ENST00000560852 VDRP11473 427 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 BPIFB4P59827 614 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 LRMPQ12912 555 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 CNGA2Q16280 664 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 IQCEQ6IPM2 695 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 RRAGAQ7L523 313 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 FUKQ8N0W3 1084 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 RNF214Q8ND24 703 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 ELMO3Q96BJ8 720 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 SPATA17Q96L03 361 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 C8orf48Q96LL4 319 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 S1PR5Q9H228 398 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 PNPLA8Q9NP80 782 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 TMLHEQ9NVH6 421 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 IL37Q9NZH6 218 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 ASB3Q9Y575 518 aa12.89□□□□□ -0.35
IRF9-211ENST00000560852 TSC2P49815 1807 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 EPHB6O15197 1021 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 AP5Z1O43299 807 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 SEC24AO95486 1093 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 PDGFRBP09619 1106 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 CPB1P15086 417 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 EPCAMP16422 314 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 ACAT1P24752 427 aaKnown RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 RAP1GAPP47736 663 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 RPL34P49207 117 aaKnown RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 EPHA5P54756 1037 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 ITIH3Q06033 890 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 ADCY1Q08828 1119 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 DRAP1Q14919 205 aaPredicted RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 SLC39A12Q504Y0 691 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 ANKRD54Q6NXT1 300 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 SYCE2Q6PIF2 218 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 LCLAT1Q6UWP7 414 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 RBM23Q86U06 439 aaKnown RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 PALB2Q86YC2 1186 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 ATAD1Q8NBU5 361 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 NEK11Q8NG66 645 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 BAP1Q92560 729 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 SYN2Q92777 582 aaPredicted RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 CYFIP2Q96F07 1278 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 MRFAP1L1Q96HT8 127 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 LSM14BQ9BX40 385 aaKnown RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 B3GNT5Q9BYG0 378 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 XPO4Q9C0E2 1151 aaKnown RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 NUCKS1Q9H1E3 243 aaKnown RBP12.88□□□□□ -0.35
IRF9-211ENST00000560852 CRISPLD1Q9H336 500 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 COMMD8Q9NX08 183 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 IFNKQ9P0W0 207 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 HMGXB4Q9UGU5 601 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
IRF9-211ENST00000560852 FAM92AA1XBS5 289 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 F8VZ95 297 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 PES1O00541 588 aaKnown RBP12.87□□□□□ -0.35
IRF9-211ENST00000560852 HCRTO43612 131 aa12.87□□□□□ -0.35
IRF9-211ENST00000560852 MICAL2O94851 1124 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms