RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 MAP3K20Q9NYL2 800 aaKnown RBP5.05□□□□□ -1.6
TMOD3-207ENST00000560549 SPEF1Q9Y4P9 236 aa5.05□□□□□ -1.6
TMOD3-207ENST00000560549 RREB1Q92766 1687 aa5.05□□□□□ -1.6
TMOD3-207ENST00000560549 RPAP1Q9BWH6 1393 aaPredicted RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 A0A1W2PRX2 142 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 ERVV-1B6SEH8 477 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 HIP1O00291 1037 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 TBX3O15119 743 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 STC2O76061 302 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 C1SP09871 688 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 IL6STP40189 918 aaPredicted RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 MCM2P49736 904 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 NUCB2P80303 420 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 SRSF2Q01130 221 aaKnown RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 FOXE3Q13461 319 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 MAPRE1Q15691 268 aaKnown RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 CCDC57Q2TAC2 916 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 VPS53Q5VIR6 699 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 STOX1Q6ZVD7 989 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 GAREM2Q75VX8 874 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 VGLL2Q8N8G2 317 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 NECAB1Q8N987 351 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 KBTBD3Q8NAB2 608 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 GCDHQ92947 438 aaPredicted RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 LPPQ93052 612 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 TCEANC2Q96MN5 208 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 NOL10Q9BSC4 688 aaKnown RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 SYT17Q9BSW7 474 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 TM6SF1Q9BZW5 370 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 PCED1AQ9H1Q7 454 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 ZNF277Q9NRM2 450 aaPredicted RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 TAGLN3Q9UI15 199 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 TRMT112Q9UI30 125 aaKnown RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 TPCN1Q9ULQ1 816 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 LIMCH1Q9UPQ0 1083 aa5.04□□□□□ -1.6
TMOD3-207ENST00000560549 LUC7L2Q9Y383 392 aaKnown RBP5.04□□□□□ -1.6
TMOD3-207ENST00000560549 RIC1Q4ADV7 1423 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 SNAP23O00161 211 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 SEC24DO94855 1032 aaPredicted RBP5.03□□□□□ -1.6
TMOD3-207ENST00000560549 LPLP06858 475 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 IFIT1P09914 478 aaKnown RBP5.03□□□□□ -1.6
TMOD3-207ENST00000560549 GAAP10253 952 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 XRCC6P12956 609 aaKnown RBP eCLIP5.03□□□□□ -1.6
TMOD3-207ENST00000560549 HTR3AP46098 478 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 SESN2P58004 480 aaPredicted RBP5.03□□□□□ -1.6
TMOD3-207ENST00000560549 CD69Q07108 199 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 IFIT5Q13325 482 aaKnown RBP5.03□□□□□ -1.6
TMOD3-207ENST00000560549 TOB2Q14106 344 aaPredicted RBP5.03□□□□□ -1.6
TMOD3-207ENST00000560549 ME3Q16798 604 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 GRAMD1BQ3KR37 738 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 MCMDC2Q4G0Z9 681 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 TMEM240Q5SV17 173 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 CCDC62Q6P9F0 684 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 CMTR2Q8IYT2 770 aaKnown RBP5.03□□□□□ -1.6
TMOD3-207ENST00000560549 D2HGDHQ8N465 521 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 CPA6Q8N4T0 437 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 GPATCH11Q8N954 259 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 GPT2Q8TD30 523 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 JADE3Q92613 823 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 PTPRHQ9HD43 1115 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 IL23AQ9NPF7 189 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 PAG1Q9NWQ8 432 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 ING3Q9NXR8 418 aa5.03□□□□□ -1.6
TMOD3-207ENST00000560549 AFDNP55196 1824 aaKnown RBP5.02□□□□□ -1.61
TMOD3-207ENST00000560549 UBE2QL1A1L167 161 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 ANKRD18BA2A2Z9 1011 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 CFAP69A5D8W1 941 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 RNF113AO15541 343 aaKnown RBP5.02□□□□□ -1.61
TMOD3-207ENST00000560549 CYP21A2P08686 494 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 VSIG10L2P0DP72 767 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 AGXTP21549 392 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 RPS6KB1P23443 525 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 ACRV1P26436 265 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 HIBADHP31937 336 aaKnown RBP5.02□□□□□ -1.61
TMOD3-207ENST00000560549 MAN1A1P33908 653 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 TXNRD1Q16881 649 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 HSP90AB3PQ58FF7 597 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 C1QL3Q5VWW1 255 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 TTLL5Q6EMB2 1281 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 TIGD7Q6NT04 549 aaPredicted RBP5.02□□□□□ -1.61
TMOD3-207ENST00000560549 ERAP2Q6P179 960 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 PGM2L1Q6PCE3 622 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 Q6ZRM9 215 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 ESPNLQ6ZVH7 1005 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 CCDC83Q8IWF9 413 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 TSPEARQ8WU66 669 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 JPH3Q8WXH2 748 aaPredicted RBP5.02□□□□□ -1.61
TMOD3-207ENST00000560549 TEKT5Q96M29 485 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 ACAP3Q96P50 834 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 QRSL1Q9H0R6 528 aaKnown RBP5.02□□□□□ -1.61
TMOD3-207ENST00000560549 ALDH8A1Q9H2A2 487 aaPredicted RBP5.02□□□□□ -1.61
TMOD3-207ENST00000560549 PIH1D3Q9NQM4 214 aaKnown RBP5.02□□□□□ -1.61
TMOD3-207ENST00000560549 HELLSQ9NRZ9 838 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 OBP2AQ9NY56 170 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 ZNF69Q9UC07 566 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 IP6K2Q9UHH9 426 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 TUBD1Q9UJT1 453 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 ZNF180Q9UJW8 692 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 EDARQ9UNE0 448 aa5.02□□□□□ -1.61
TMOD3-207ENST00000560549 PCDHB6Q9Y5E3 794 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms