RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 CLDN3O15551 220 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 FAM189A1O60320 539 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 FAM13AO94988 1023 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 SERPINC1P01008 464 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 CLTAP09496 248 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 MYL4P12829 197 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 CYP3A5P20815 502 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 SMTNP53814 917 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 NCKAP1LP55160 1127 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 MLLT6P55198 1093 aaPredicted RBP15.09■□□□□ 0.01
LDLR-213ENST00000560502 YWHAHQ04917 246 aaPredicted RBP15.09■□□□□ 0.01
LDLR-213ENST00000560502 RAD51AP2Q09MP3 1159 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 ALCAMQ13740 583 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 TEAD2Q15562 447 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 TTI2Q6NXR4 508 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 MFSD6LQ8IWD5 586 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 FAM3CQ92520 227 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 MED15Q96RN5 788 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 TSG101Q99816 390 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 IMPACTQ9P2X3 320 aa15.09■□□□□ 0.01
LDLR-213ENST00000560502 DENND4CQ5VZ89 1909 aa15.08■□□□□ 0
LDLR-213ENST00000560502 HEPACAM2A8MVW5 462 aa15.08■□□□□ 0
LDLR-213ENST00000560502 PTMAP06454 111 aaKnown RBP15.08■□□□□ 0
LDLR-213ENST00000560502 ADRB2P07550 413 aa15.08■□□□□ 0
LDLR-213ENST00000560502 OR4Q2P0C623 313 aa15.08■□□□□ 0
LDLR-213ENST00000560502 CHRNB1P11230 501 aa15.08■□□□□ 0
LDLR-213ENST00000560502 CDK11BP21127 795 aaKnown RBP15.08■□□□□ 0
LDLR-213ENST00000560502 SCP2P22307 547 aa15.08■□□□□ 0
LDLR-213ENST00000560502 EEF1GP26641 437 aaKnown RBP15.08■□□□□ 0
LDLR-213ENST00000560502 TNFSF9P41273 254 aa15.08■□□□□ 0
LDLR-213ENST00000560502 CCR3P51677 355 aa15.08■□□□□ 0
LDLR-213ENST00000560502 LMNB2Q03252 620 aa15.08■□□□□ 0
LDLR-213ENST00000560502 FCHO2Q0JRZ9 810 aa15.08■□□□□ 0
LDLR-213ENST00000560502 GPR17Q13304 367 aa15.08■□□□□ 0
LDLR-213ENST00000560502 PLD1Q13393 1074 aa15.08■□□□□ 0
LDLR-213ENST00000560502 GAS6Q14393 721 aa15.08■□□□□ 0
LDLR-213ENST00000560502 BMT2Q1RMZ1 405 aa15.08■□□□□ 0
LDLR-213ENST00000560502 SECISBP2LQ93073 1101 aaKnown RBP15.08■□□□□ 0
LDLR-213ENST00000560502 E2F7Q96AV8 911 aa15.08■□□□□ 0
LDLR-213ENST00000560502 GPR88Q9GZN0 384 aa15.08■□□□□ 0
LDLR-213ENST00000560502 LMAN1LQ9HAT1 526 aa15.08■□□□□ 0
LDLR-213ENST00000560502 PARVGQ9HBI0 331 aa15.08■□□□□ 0
LDLR-213ENST00000560502 SLC39A2Q9NP94 309 aa15.08■□□□□ 0
LDLR-213ENST00000560502 PARD6AQ9NPB6 346 aa15.08■□□□□ 0
LDLR-213ENST00000560502 UBQLN1Q9UMX0 589 aaKnown RBP15.08■□□□□ 0
LDLR-213ENST00000560502 TIMM13Q9Y5L4 95 aaPredicted RBP15.08■□□□□ 0
LDLR-213ENST00000560502 SCN1AP35498 2009 aa15.08■□□□□ 0
LDLR-213ENST00000560502 NPHP3-ACAD11A0A0J9YXS1 232 aa15.07■□□□□ 0
LDLR-213ENST00000560502 OR6C75A6NL08 312 aa15.07■□□□□ 0
LDLR-213ENST00000560502 PRR5-ARHGAP8B1AHC4 643 aa15.07■□□□□ 0
LDLR-213ENST00000560502 ZNF263O14978 683 aa15.07■□□□□ 0
LDLR-213ENST00000560502 PIGRP01833 764 aa15.07■□□□□ 0
LDLR-213ENST00000560502 TYMPP19971 482 aa15.07■□□□□ 0
LDLR-213ENST00000560502 SDHBP21912 280 aa15.07■□□□□ 0
LDLR-213ENST00000560502 ABCD1P33897 745 aa15.07■□□□□ 0
LDLR-213ENST00000560502 GUCY2FP51841 1108 aa15.07■□□□□ 0
LDLR-213ENST00000560502 NRLP54845 237 aa15.07■□□□□ 0
LDLR-213ENST00000560502 UBASH3AP57075 661 aa15.07■□□□□ 0
LDLR-213ENST00000560502 ARHGAP8P85298 464 aa15.07■□□□□ 0
LDLR-213ENST00000560502 ENOX2Q16206 610 aaKnown RBP15.07■□□□□ 0
LDLR-213ENST00000560502 FILIP1LQ4L180 1135 aa15.07■□□□□ 0
LDLR-213ENST00000560502 WDR44Q5JSH3 913 aa15.07■□□□□ 0
LDLR-213ENST00000560502 KIF12Q96FN5 646 aa15.07■□□□□ 0
LDLR-213ENST00000560502 MSANTD3Q96H12 275 aa15.07■□□□□ 0
LDLR-213ENST00000560502 PGLYRP2Q96PD5 576 aa15.07■□□□□ 0
LDLR-213ENST00000560502 MKNK1Q9BUB5 465 aa15.07■□□□□ 0
LDLR-213ENST00000560502 IFNKQ9P0W0 207 aa15.07■□□□□ 0
LDLR-213ENST00000560502 LARSQ9P2J5 1176 aaKnown RBP15.07■□□□□ 0
LDLR-213ENST00000560502 MAGEC2Q9UBF1 373 aaPredicted RBP15.07■□□□□ 0
LDLR-213ENST00000560502 LIMA1Q9UHB6 759 aaKnown RBP15.07■□□□□ 0
LDLR-213ENST00000560502 RALGAPA1Q6GYQ0 2036 aa15.07■□□□□ 0
LDLR-213ENST00000560502 KMT2BQ9UMN6 2715 aaPredicted RBP15.07■□□□□ 0
LDLR-213ENST00000560502 A0A1W2PRU2 124 aa15.06■□□□□ 0
LDLR-213ENST00000560502 MTMR11A4FU01 709 aa15.06■□□□□ 0
LDLR-213ENST00000560502 LRRC10BA6NIK2 292 aa15.06■□□□□ 0
LDLR-213ENST00000560502 LACTBL1A8MY62 500 aa15.06■□□□□ 0
LDLR-213ENST00000560502 H0YCG3 227 aa15.06■□□□□ 0
LDLR-213ENST00000560502 PPEF2O14830 753 aa15.06■□□□□ 0
LDLR-213ENST00000560502 CHADO15335 359 aa15.06■□□□□ 0
LDLR-213ENST00000560502 PAPSS2O95340 614 aaPredicted RBP15.06■□□□□ 0
LDLR-213ENST00000560502 TPM2P07951 284 aa15.06■□□□□ 0
LDLR-213ENST00000560502 ATP1A3P13637 1013 aa15.06■□□□□ 0
LDLR-213ENST00000560502 PRKCSHP14314 528 aaPredicted RBP15.06■□□□□ 0
LDLR-213ENST00000560502 ATXN1P54253 815 aaKnown RBP15.06■□□□□ 0
LDLR-213ENST00000560502 STX17P56962 302 aa15.06■□□□□ 0
LDLR-213ENST00000560502 GSDMDP57764 484 aa15.06■□□□□ 0
LDLR-213ENST00000560502 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
LDLR-213ENST00000560502 PPP2R3AQ06190 1150 aa15.06■□□□□ 0
LDLR-213ENST00000560502 DUSP4Q13115 394 aa15.06■□□□□ 0
LDLR-213ENST00000560502 MYBPC2Q14324 1141 aa15.06■□□□□ 0
LDLR-213ENST00000560502 KYAT1Q16773 422 aa15.06■□□□□ 0
LDLR-213ENST00000560502 EDRF1Q3B7T1 1238 aa15.06■□□□□ 0
LDLR-213ENST00000560502 STXBP5Q5T5C0 1151 aa15.06■□□□□ 0
LDLR-213ENST00000560502 EPM2AIP1Q7L775 607 aaPredicted RBP15.06■□□□□ 0
LDLR-213ENST00000560502 HAUS6Q7Z4H7 955 aa15.06■□□□□ 0
LDLR-213ENST00000560502 SFR1Q86XK3 245 aa15.06■□□□□ 0
LDLR-213ENST00000560502 CSGALNACT2Q8N6G5 542 aa15.06■□□□□ 0
LDLR-213ENST00000560502 TSPAN18Q96SJ8 248 aa15.06■□□□□ 0
LDLR-213ENST00000560502 XPO4Q9C0E2 1151 aaKnown RBP15.06■□□□□ 0
LDLR-213ENST00000560502 GMEB2Q9UKD1 530 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms