RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 DGKEP52429 567 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 ZNF252P-AS1Q0IIN9 211 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 KARSQ15046 597 aaKnown RBP11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 TMEM196Q5HYL7 178 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 DAB2IPQ5VWQ8 1189 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 SPATA1Q5VX52 437 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 CPA6Q8N4T0 437 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 MYCT1Q8N699 235 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 STKLD1Q8NE28 680 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 RPLP0P6Q8NHW5 317 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 SPPL2BQ8TCT7 592 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 NTPCRQ9BSD7 190 aaKnown RBP11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 SLC46A2Q9BY10 475 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 TRPC7Q9HCX4 862 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 PPP4R2Q9NY27 417 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 DSEQ9UL01 958 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 INVSQ9Y283 1065 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 KIAA1549LQ6ZVL6 1849 aa11.34□□□□□ -0.59
CDC42BPB-207ENST00000560492 CCDC163A0A0D9SF12 145 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 VWA3AA6NCI4 1184 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 C4orf47A7E2U8 309 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 DCLK1O15075 740 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 PRPF40AO75400 957 aaKnown RBP11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 AKAP3O75969 853 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 APBB3O95704 486 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 CAVIN2O95810 425 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 NFICP08651 508 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 DRD1P21728 446 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 PRPHP41219 470 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 IFNAR2P48551 515 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 TAF6P49848 677 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 SHC2P98077 582 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 TSPY1Q01534 308 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZBTB6Q15916 424 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 PLK5Q496M5 336 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 GPBP1Q86WP2 473 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 DCP1BQ8IZD4 617 aaKnown RBP11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 SYT2Q8N9I0 419 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 ACDQ96AP0 544 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 CHFRQ96EP1 664 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 P2RY13Q9BPV8 354 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 LLPHQ9BRT6 129 aaKnown RBP11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 MMTAG2Q9BU76 263 aaKnown RBP11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZCWPW1Q9H0M4 648 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 KIF9Q9HAQ2 790 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 IL21Q9HBE4 155 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 HPS4Q9NQG7 708 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 SH2B1Q9NRF2 756 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 TDP1Q9NUW8 608 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 HSFX1Q9UBD0 423 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZMYM5Q9UJ78 669 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 CCL26Q9Y258 94 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 PCDHB5Q9Y5E4 795 aa11.33□□□□□ -0.6
CDC42BPB-207ENST00000560492 C1QTNF9BB2RNN3 333 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 TRDMT1O14717 391 aaKnown RBP11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 TM4SF5O14894 197 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 CKMP06732 381 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 PROS1P07225 676 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 C1QTNF9P0C862 333 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 PAX3P23760 479 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 DDX6P26196 483 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 ACOT2P49753 483 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 GALK1P51570 392 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 NCKAP1LP55160 1127 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 NLRP12P59046 1061 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 DMC1Q14565 340 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 IL17AQ16552 155 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 UAP1L1Q3KQV9 507 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 TXNDC8Q6A555 127 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 UNQ6494/PRO21346Q6UXR6 183 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 CD302Q8IX05 232 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 C2orf15Q8WU43 125 aaKnown RBP11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 USP13Q92995 863 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 TSPAN18Q96SJ8 248 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 TPSD1Q9BZJ3 242 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 DUS2Q9NX74 493 aaKnown RBP11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 KCND2Q9NZV8 630 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 TBX20Q9UMR3 447 aa11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 HELZP42694 1942 aaKnown RBP11.32□□□□□ -0.6
CDC42BPB-207ENST00000560492 FRYQ5TBA9 3013 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 OTOL1A6NHN0 477 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 GIPC1O14908 333 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 EIF5BO60841 1220 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 TBCAO75347 108 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 CYP11A1P05108 521 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 CSH1P0DML2 217 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 CSH2P0DML3 217 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 SPINK2P20155 84 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 WEE1P30291 646 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 GPR15P49685 360 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 SLC12A3P55017 1021 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 SEC13P55735 322 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 NR1H3Q13133 447 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms