RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SNX16P57768 344 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 TAS2R40P59535 323 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 RBP5P82980 135 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 INCA1Q0VD86 236 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 SLC29A2Q14542 456 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 CNGA2Q16280 664 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 TAZQ16635 292 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 DUSP28Q4G0W2 176 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 EAPPQ56P03 285 aaPredicted RBP10.25□□□□□ -0.77
RTF1-206ENST00000560447 TFDP3Q5H9I0 405 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 EEF1DP3Q658K8 133 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 IQSEC1Q6DN90 963 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 PCGF5Q86SE9 256 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 NLRP14Q86W24 1093 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 VSIG1Q86XK7 387 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 THNSL1Q8IYQ7 743 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 WNT2BQ93097 391 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 NKD2Q969F2 451 aaPredicted RBP10.25□□□□□ -0.77
RTF1-206ENST00000560447 TTC25Q96NG3 672 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 SLITRK1Q96PX8 696 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 CCDC77Q9BR77 488 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 KATNBL1Q9H079 304 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 PDZD7Q9H5P4 517 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 CCDC134Q9H6E4 229 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 CHST7Q9NS84 486 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.25□□□□□ -0.77
RTF1-206ENST00000560447 CHORDC1Q9UHD1 332 aaPredicted RBP10.25□□□□□ -0.77
RTF1-206ENST00000560447 RSPH14Q9UHP6 348 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 NOVA2Q9UNW9 492 aaKnown RBP10.25□□□□□ -0.77
RTF1-206ENST00000560447 GMNCA6NCL1 334 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 GPR25O00155 361 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 RASGRF2O14827 1237 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 TRAPPC3O43617 180 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 LIASO43766 372 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 PEX10O60683 326 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 CILPO75339 1184 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 TTC4O95801 387 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 ITGAVP06756 1048 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 CFHP08603 1231 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 CXCL8P10145 99 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 BRD2P25440 801 aaKnown RBP10.24□□□□□ -0.77
RTF1-206ENST00000560447 KLRC2P26717 231 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 ADORA2AP29274 412 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 GJA5P36382 358 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 KCNJ1P48048 391 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 ATP1A2P50993 1020 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 RAD23BP54727 409 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 MAGOHP61326 146 aaKnown RBP10.24□□□□□ -0.77
RTF1-206ENST00000560447 PTPN11Q06124 597 aaPredicted RBP10.24□□□□□ -0.77
RTF1-206ENST00000560447 GRB14Q14449 540 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 STAT4Q14765 748 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 TMEM132DQ14C87 1099 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 SEZ6Q53EL9 994 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 WDR78Q5VTH9 848 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 MTHFD1LQ6UB35 978 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 SPOCD1Q6ZMY3 1216 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 CPNE8Q86YQ8 564 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 PASD1Q8IV76 773 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 WDTC1Q8N5D0 677 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 C1orf127Q8N9H9 656 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 OR2W6PQ8NHA6 318 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 CXorf38Q8TB03 319 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 C1orf54Q8WWF1 131 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 COPS5Q92905 334 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 MCRS1Q96EZ8 462 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 TMEM176AQ96HP8 235 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 PARK7Q99497 189 aaKnown RBP10.24□□□□□ -0.77
RTF1-206ENST00000560447 TRIM7Q9C029 511 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 CENPHQ9H3R5 247 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 RNPEPQ9H4A4 650 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 EFCC1Q9HA90 598 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 SIX4Q9UIU6 781 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 ANAPC5Q9UJX4 755 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 PTPN22Q9Y2R2 807 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 ACTL7BQ9Y614 415 aa10.24□□□□□ -0.77
RTF1-206ENST00000560447 hCG_1818297A0A087WSY0 165 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 A0A087WUV0 522 aaPredicted RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 A0A087WZ62 844 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 A0A1B0GUA9 196 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 SLC15A5A6NIM6 579 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 LACTBL1A8MY62 500 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 ZNF487B1APH4 448 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 H3BRB1 525 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 PDHXO00330 501 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 DNALI1O14645 258 aaPredicted RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 B4GALT5O43286 388 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 CAND2O75155 1236 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 KRT1P04264 644 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 KRT3P12035 628 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 DESP17661 470 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 CD58P19256 250 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 AXLP30530 894 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 PCK1P35558 622 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 ADCY8P40145 1251 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 CCT5P48643 541 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 ITGA8P53708 1063 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 PTPN5P54829 565 aa10.23□□□□□ -0.77
RTF1-206ENST00000560447 VCPP55072 806 aaKnown RBP10.23□□□□□ -0.77
RTF1-206ENST00000560447 GUCY1A3Q02108 690 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms