RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 POTEHQ6S545 545 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 C1orf210Q8IVY1 113 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 DCP1BQ8IZD4 617 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 SPPL2BQ8TCT7 592 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 TMC2Q8TDI7 906 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 ASB16Q96NS5 453 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 PKMYT1Q99640 499 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 LRRC3Q9BY71 257 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 FOXQ1Q9C009 403 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 XYLT2Q9H1B5 865 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 TRPV4Q9HBA0 871 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 ASAH2Q9NR71 780 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 RMND1Q9NWS8 449 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 DDX43Q9NXZ2 648 aaKnown RBP16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 CHMP5Q9NZZ3 219 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 SLC27A5Q9Y2P5 690 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 ASB3Q9Y575 518 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 DMXL1Q9Y485 3027 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 COL4A3Q01955 1670 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 LRRIQ3A6PVS8 624 aaPredicted RBP16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 MOSPD3O75425 235 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 SMC2O95347 1197 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 GLULP15104 373 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 ATICP31939 592 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 ALDH1A3P47895 512 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 TUFMP49411 452 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 TSPY1Q01534 308 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 ENPEPQ07075 957 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 NFE2Q16621 373 aaPredicted RBP16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 ZC3H14Q6PJT7 736 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 OSTM1Q86WC4 334 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 TTC9BQ8N6N2 239 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 KBTBD7Q8WVZ9 684 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 TCEAL4Q96EI5 215 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 GTPBP4Q9BZE4 634 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 GPR88Q9GZN0 384 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 ZFP14Q9HCL3 533 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 MAPK8IP1Q9UQF2 711 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 PCDHA5Q9Y5H7 936 aa16.27■□□□□ 0.2
SNRPA1-210ENST00000560383 GVINP1Q7Z2Y8 2422 aa16.27■□□□□ 0.19
SNRPA1-210ENST00000560383 NUP210Q8TEM1 1887 aaPredicted RBP16.27■□□□□ 0.19
SNRPA1-210ENST00000560383 IKBKBO14920 756 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 AKAP3O75969 853 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 C4BPAP04003 597 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 WARSP23381 471 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 NR2F2P24468 414 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 PCSK1P29120 753 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 EPHB3P54753 998 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 MYL7Q01449 175 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 EDRF1Q3B7T1 1238 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 INTS6LQ5JSJ4 861 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 FAM78AQ5JUQ0 283 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 ZNF658Q5TYW1 1059 aaPredicted RBP16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 TDRD10Q5VZ19 366 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 TANGO2Q6ICL3 276 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 TMC8Q8IU68 726 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 HS6ST3Q8IZP7 471 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 DEPDC1BQ8WUY9 529 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 SMARCD2Q92925 531 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 PSMG2Q969U7 264 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 NELL2Q99435 816 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 PLA2G2FQ9BZM2 168 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 ABCB6Q9NP58 842 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 LTB4R2Q9NPC1 389 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 TRPV5Q9NQA5 729 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 TMLHEQ9NVH6 421 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 FRMD4BQ9Y2L6 1034 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 PCDHB5Q9Y5E4 795 aa16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 PTPRZ1P23471 2315 aaPredicted RBP16.26■□□□□ 0.19
SNRPA1-210ENST00000560383 CACNA1IQ9P0X4 2223 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 NRG2O14511 850 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 GADD45BO75293 160 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 TACC1O75410 805 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 HAPLN1P10915 354 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 ATF6P18850 670 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 RPL13P26373 211 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 RPS9P46781 194 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 MYL6P60660 151 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 DLG4P78352 724 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 ZNF528Q3MIS6 628 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 ZACNQ401N2 412 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 CEP135Q66GS9 1140 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 FAM171BQ6P995 826 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 TPRG1Q6ZUI0 275 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 DNAJB7Q7Z6W7 309 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 SMYD4Q8IYR2 804 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 SYAP1Q96A49 352 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 E2F7Q96AV8 911 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 FBXO4Q9UKT5 387 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 MRPS17Q9Y2R5 130 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 TICRRQ7Z2Z1 1910 aa16.25■□□□□ 0.19
SNRPA1-210ENST00000560383 SPTBN4Q9H254 2564 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 FAM170BA6NMN3 283 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 NCAM2O15394 837 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms