RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 NME7Q9Y5B8 376 aa14.9□□□□□ -0.02
CARMIL3-203ENST00000560349 MEIS3P2A8K0S8 358 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 SLC10A3P09131 477 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 CHRNA3P32297 505 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 CCDC142Q17RM4 750 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 GNASQ5JWF2 1037 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 NOTUMQ6P988 496 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 ACOT1Q86TX2 421 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 RHOT1Q8IXI2 618 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 IQCKQ8N0W5 287 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 FMO2Q99518 471 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 ZWILCHQ9H900 591 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 GEMIN8Q9NWZ8 242 aaKnown RBP14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 TCRBV5S1A1TA0A578 114 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 MBLAC1A4D2B0 266 aaPredicted RBP14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 BHMG1C9JSJ3 638 aaPredicted RBP14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 CALB1P05937 261 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 CPT1AP50416 773 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 CORO7P57737 925 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 PPP1R7Q15435 360 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 FAM47CQ5HY64 1035 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 CEP85LQ5SZL2 805 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 ZNF618Q5T7W0 954 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 TMC3Q7Z5M5 1100 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 WNT8BQ93098 351 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 VCPIP1Q96JH7 1222 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 SNX27Q96L92 541 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 RAB17Q9H0T7 212 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 YY1AP1Q9H869 796 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 ZFYVE28Q9HCC9 887 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 FAM155AB1AL88 458 aaPredicted RBP14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 LSM8O95777 96 aaKnown RBP14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 KRT1P04264 644 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 SLC1A1P43005 524 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 RBP5P82980 135 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 ZDHHC24Q6UX98 284 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 CCDC25Q86WR0 208 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 TRIB2Q92519 343 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 RAPGEF5Q92565 580 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 DPEP3Q9H4B8 488 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 GRHL1Q9NZI5 618 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 PCSK1NQ9UHG2 260 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 PCDHGC3Q9UN70 934 aa14.89□□□□□ -0.03
CARMIL3-203ENST00000560349 SMIM35A0A1B0GVV1 85 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 GOLGA8KD6RF30 607 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 FSCN2O14926 492 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 HSPA9P38646 679 aaKnown RBP14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 MAGEA9P43362 315 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 DYNLT1P63172 113 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 ADAM17P78536 824 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 PURAQ00577 322 aaKnown RBP14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 KRT17Q04695 432 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 NNTQ13423 1086 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 CYP4F22Q6NT55 531 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 MFSD7Q6UXD7 560 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 ARRDC4Q8NCT1 418 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 ZFP42Q96MM3 310 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 OSBPL8Q9BZF1 889 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 OSBPL7Q9BZF2 842 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 ZDHHC18Q9NUE0 388 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 SAE1Q9UBE0 346 aaPredicted RBP14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 IP6K2Q9UHH9 426 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 TSPAN16Q9UKR8 245 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 ITGA11Q9UKX5 1188 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 C2CD2Q9Y426 696 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 C17orf102A2RUQ5 167 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 PDGFRBP09619 1106 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 KRT3P12035 628 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 PSMA2P25787 234 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 ATP1A2P50993 1020 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 YWHAEP62258 255 aaKnown RBP14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 DHX34Q14147 1143 aaKnown RBP14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 ALS2CLQ60I27 953 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 SEC14L1Q92503 715 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 PWWP2AQ96N64 755 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 CAPS2Q9BXY5 557 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 FAM114A2Q9NRY5 505 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 PCYOX1Q9UHG3 505 aa14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.88□□□□□ -0.03
CARMIL3-203ENST00000560349 LAMA3Q16787 3333 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 LRRD1A4D1F6 860 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 AFF1P51825 1210 aaKnown RBP14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 SOX4Q06945 474 aaPredicted RBP14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 PDCLQ13371 301 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 TAF5Q15542 800 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 DCAF4L1Q3SXM0 396 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 PPP1R15BQ5SWA1 713 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 PPP1R26Q5T8A7 1209 aaPredicted RBP14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 XYLT1Q86Y38 959 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 ARFGAP1Q8N6T3 406 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 C3orf20Q8ND61 904 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 C10orf88Q9H8K7 445 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 ASIC3Q9UHC3 531 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 GRIN2DO15399 1336 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 SMIM23A6NLE4 172 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 HAS3O00219 553 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms