RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 CCDC42Q96M95 316 aa11.29□□□□□ -0.6
KNSTRN-209ENST00000560220 INPP4AQ96PE3 977 aaPredicted RBP11.29□□□□□ -0.6
KNSTRN-209ENST00000560220 FAM49AQ9H0Q0 323 aaPredicted RBP11.29□□□□□ -0.6
KNSTRN-209ENST00000560220 NUCKS1Q9H1E3 243 aaKnown RBP11.29□□□□□ -0.6
KNSTRN-209ENST00000560220 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
KNSTRN-209ENST00000560220 UNC45AQ9H3U1 944 aa11.29□□□□□ -0.6
KNSTRN-209ENST00000560220 RAB21Q9UL25 225 aa11.29□□□□□ -0.6
KNSTRN-209ENST00000560220 GUCA1BQ9UMX6 200 aa11.29□□□□□ -0.6
KNSTRN-209ENST00000560220 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 ERVH48-1M5A8F1 160 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 USO1O60763 962 aaKnown RBP11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 FAM13AO94988 1023 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 LCA5LO95447 670 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 PSAPP07602 524 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 TGFB3P10600 412 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 ABCD1P33897 745 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 PXNP49023 591 aaPredicted RBP11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 KLK7P49862 253 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 VAV2P52735 878 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 PSMC5P62195 406 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 FAM189BP81408 668 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 KIF5AQ12840 1032 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 ALCAMQ13740 583 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 KRTAP21-3Q3LHN1 58 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 B3GNT9Q6UX72 402 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 LRRC69Q6ZNQ3 347 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 PRICKLE2Q7Z3G6 844 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 ZC3H3Q8IXZ2 948 aaKnown RBP11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 C4orf19Q8IY42 314 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 NEK11Q8NG66 645 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 SYN2Q92777 582 aaPredicted RBP11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 DNASE1L2Q92874 299 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 LXNQ9BS40 222 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 CELF4Q9BZC1 486 aaKnown RBP11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 GBP3Q9H0R5 595 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 DUSP15Q9H1R2 295 aaPredicted RBP11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 ZHX3Q9H4I2 956 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 ANKEF1Q9NU02 776 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 PCDHA2Q9Y5H9 948 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 PCDHA10Q9Y5I2 948 aa11.28□□□□□ -0.6
KNSTRN-209ENST00000560220 ANO9A1A5B4 782 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 UPK3BL1B0FP48 263 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 UPK3BL2E5RIL1 263 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 EML1O00423 815 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 MEFVO15553 781 aaPredicted RBP11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 CALUO43852 315 aaPredicted RBP11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 ERLIN1O75477 346 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 C6P13671 934 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 GUCY2CP25092 1073 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 RPL13P26373 211 aaKnown RBP11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 PLA2G4AP47712 749 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 MARSP56192 900 aaKnown RBP11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 IRX4P78413 519 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 SP2Q02086 613 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 CKAP4Q07065 602 aaKnown RBP11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 PPFIA1Q13136 1202 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 SEMA3BQ13214 749 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 LY6DQ14210 128 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 CTTNQ14247 550 aaKnown RBP11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 LRRC32Q14392 662 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 EDRF1Q3B7T1 1238 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 MIS18BP1Q6P0N0 1132 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 ZNF574Q6ZN55 896 aaPredicted RBP11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 TRIM50Q86XT4 487 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 PNPLA1Q8N8W4 532 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 FGF13Q92913 245 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 EEF2KMTQ96G04 330 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 PHF12Q96QT6 1004 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 PARVGQ9HBI0 331 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 OLFML3Q9NRN5 406 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 RGL1Q9NZL6 768 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 LARSQ9P2J5 1176 aaKnown RBP11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 SAR1BQ9Y6B6 198 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 UBE4BO95155 1302 aa11.27□□□□□ -0.61
KNSTRN-209ENST00000560220 COL6A6A6NMZ7 2263 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 PTPRQQ9UMZ3 2332 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 NOTCH2Q04721 2471 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 ASCC3Q8N3C0 2202 aaKnown RBP11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 CCDC163A0A0D9SF12 145 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 PATE3B3GLJ2 98 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 DDX39AO00148 427 aaKnown RBP11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 EIF3DO15371 548 aaKnown RBP eCLIP11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 DHX15O43143 795 aaKnown RBP11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 GLUD1P00367 558 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 MAPTP10636 758 aaKnown RBP11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 SCP2P22307 547 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 UBA1P22314 1058 aaKnown RBP11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 MCM3P25205 808 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 IL12RB1P42701 662 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 MAPK8P45983 427 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 LMAN2Q12907 356 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 HNRNPDQ14103 355 aaKnown RBP11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 NEDD9Q14511 834 aa11.26□□□□□ -0.61
KNSTRN-209ENST00000560220 TERF2Q15554 542 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms