RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 UPP1Q16831 310 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 PPP1R15BQ5SWA1 713 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 SLC39A5Q6ZMH5 540 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 ACOT1Q86TX2 421 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 PDCL2Q8N4E4 241 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 MMGT1Q8N4V1 131 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 STK32AQ8WU08 396 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 TSC1Q92574 1164 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 C18orf8Q96DM3 657 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 TNIP3Q96KP6 325 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 PSMB7Q99436 277 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 CYTH4Q9UIA0 394 aa15.32■□□□□ 0.04
ZEB1-218ENST00000560196 TMEM191CA6NGB0 347 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 NBNO60934 754 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 TUBBP07437 444 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 PFKMP08237 780 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 CTNNA1P35221 906 aaKnown RBP15.31■□□□□ 0.04
ZEB1-218ENST00000560196 PEX5P50542 639 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 DNAJC24Q6P3W2 148 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 GLB1LQ6UWU2 654 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 ANKLE1Q8NAG6 615 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 RNF169Q8NCN4 708 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 SPATA4Q8NEY3 305 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 RSPH1Q8WYR4 309 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 SEPT8Q92599 483 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 SENP8Q96LD8 212 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 CYLDQ9NQC7 956 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 TMEM161AQ9NX61 479 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 KANSL3Q9P2N6 904 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.31■□□□□ 0.04
ZEB1-218ENST00000560196 CHORDC1Q9UHD1 332 aaPredicted RBP15.31■□□□□ 0.04
ZEB1-218ENST00000560196 IP6K2Q9UHH9 426 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 TSPAN16Q9UKR8 245 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
ZEB1-218ENST00000560196 V9GYY5 206 aaPredicted RBP15.31■□□□□ 0.04
ZEB1-218ENST00000560196 FAM170AA1A519 330 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 ARHGEF37A1IGU5 675 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 SIGLEC16A6NMB1 481 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 TMEM110-MUSTN1A8MSY1 372 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 DCDC2CA8MYV0 355 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 PGRMC1O00264 195 aaKnown RBP15.3■□□□□ 0.04
ZEB1-218ENST00000560196 SPOPO43791 374 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 CXCL10P02778 98 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
ZEB1-218ENST00000560196 LHX1P48742 406 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 CLCNKBP51801 687 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 SNX16P57768 344 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 PDCLQ13371 301 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 GOLGA7BQ2TAP0 167 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 PPP1R26Q5T8A7 1209 aaPredicted RBP15.3■□□□□ 0.04
ZEB1-218ENST00000560196 OSTM1Q86WC4 334 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 FNIP1Q8TF40 1166 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 MCRS1Q96EZ8 462 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 BTBD6Q96KE9 485 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 CPXM1Q96SM3 734 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.3■□□□□ 0.04
ZEB1-218ENST00000560196 SLC4A5Q9BY07 1137 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 HESX1Q9UBX0 185 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 TMEM59LQ9UK28 342 aa15.3■□□□□ 0.04
ZEB1-218ENST00000560196 CASTOR2A6NHX0 329 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 TMEM189-UBE2V1I3L0A0 370 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 ENPP3O14638 875 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 CEP104O60308 925 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 PQBP1O60828 265 aaKnown RBP15.29■□□□□ 0.04
ZEB1-218ENST00000560196 CYP11A1P05108 521 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 RPL34P49207 117 aaKnown RBP15.29■□□□□ 0.04
ZEB1-218ENST00000560196 BCAT1P54687 386 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 PSMC1P62191 440 aaKnown RBP15.29■□□□□ 0.04
ZEB1-218ENST00000560196 DSC1Q08554 894 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 C2CD6Q53TS8 623 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 NOMO2Q5JPE7 1267 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 WSCD1Q658N2 575 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 LLGL2Q6P1M3 1020 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 DCLRE1AQ6PJP8 1040 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 CD300LGQ6UXG3 332 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 DSTYKQ6XUX3 929 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 TTC30AQ86WT1 665 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 XYLT1Q86Y38 959 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 NIPA2Q8N8Q9 360 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 C12orf29Q8N999 325 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 ANKRD52Q8NB46 1076 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 NOA1Q8NC60 698 aaKnown RBP15.29■□□□□ 0.04
ZEB1-218ENST00000560196 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.29■□□□□ 0.04
ZEB1-218ENST00000560196 URGCPQ8TCY9 931 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 IPO4Q8TEX9 1081 aaKnown RBP15.29■□□□□ 0.04
ZEB1-218ENST00000560196 SLC35F5Q8WV83 523 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 ALG3Q92685 438 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 MS4A14Q96JA4 679 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 NAP1L3Q99457 506 aaPredicted RBP15.29■□□□□ 0.04
ZEB1-218ENST00000560196 HNRNPABQ99729 332 aaKnown RBP15.29■□□□□ 0.04
ZEB1-218ENST00000560196 TRIM7Q9C029 511 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 DPEP3Q9H4B8 488 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 DSEQ9UL01 958 aa15.29■□□□□ 0.04
ZEB1-218ENST00000560196 M0QZQ0 153 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 MYCP01106 439 aaPredicted RBP15.28■□□□□ 0.04
ZEB1-218ENST00000560196 POMCP01189 267 aa15.28■□□□□ 0.04
ZEB1-218ENST00000560196 ERBB2P04626 1255 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms