RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TNFSF13BQ9Y275 285 aa22.14■■□□□ 1.13
PSEN1-225ENST00000560005 SPAG17Q6Q759 2223 aa22.14■■□□□ 1.13
PSEN1-225ENST00000560005 SPEGQ15772 3267 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 FRMD3A2A2Y4 597 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 TBCAO75347 108 aaKnown RBP22.13■■□□□ 1.13
PSEN1-225ENST00000560005 ZNF806P0C7X5 589 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 PRCPP42785 496 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 NCAPHQ15003 741 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 PON2Q15165 354 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 FOXR2Q6PJQ5 311 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 RALGPS2Q86X27 583 aaPredicted RBP22.13■■□□□ 1.13
PSEN1-225ENST00000560005 C18orf25Q96B23 403 aaPredicted RBP22.13■■□□□ 1.13
PSEN1-225ENST00000560005 ZFYVE19Q96K21 471 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 SUSD3Q96L08 255 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 TRIM5Q9C035 493 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 GTSE1Q9NYZ3 720 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 SEL1LQ9UBV2 794 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 MAFFQ9ULX9 164 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 YIPF1Q9Y548 306 aa22.13■■□□□ 1.13
PSEN1-225ENST00000560005 EPN2O95208 641 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 ADCY5O95622 1261 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 PROS1P07225 676 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 GUCY2CP25092 1073 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 RPL9P32969 192 aaKnown RBP22.12■■□□□ 1.13
PSEN1-225ENST00000560005 PXNP49023 591 aaPredicted RBP22.12■■□□□ 1.13
PSEN1-225ENST00000560005 EHHADHQ08426 723 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 CCINQ13939 588 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 ZNF568Q3ZCX4 644 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 ARSHQ5FYA8 562 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 FAM26FQ5R3K3 315 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 STXBP5Q5T5C0 1151 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 KLHL10Q6JEL2 608 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 C1orf186Q6ZWK4 172 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 GUF1Q8N442 669 aaKnown RBP22.12■■□□□ 1.13
PSEN1-225ENST00000560005 NOC3LQ8WTT2 800 aaKnown RBP22.12■■□□□ 1.13
PSEN1-225ENST00000560005 NELFBQ8WX92 580 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 LOXL4Q96JB6 756 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 LRRC3BQ96PB8 259 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 LRRC3Q9BY71 257 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 IGF2RP11717 2491 aa22.12■■□□□ 1.13
PSEN1-225ENST00000560005 K7ERI5 159 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 CBFA2T2O43439 604 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 EXTL3O43909 919 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 RPP40O75818 363 aaKnown RBP22.11■■□□□ 1.13
PSEN1-225ENST00000560005 FGFR1OPO95684 399 aaKnown RBP22.11■■□□□ 1.13
PSEN1-225ENST00000560005 KCNE1P15382 129 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 CD44P16070 742 aaKnown RBP22.11■■□□□ 1.13
PSEN1-225ENST00000560005 COL9A2Q14055 689 aaPredicted RBP22.11■■□□□ 1.13
PSEN1-225ENST00000560005 CACNA2D4Q7Z3S7 1137 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 KBTBD6Q86V97 674 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 TMC8Q8IU68 726 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 ARID3BQ8IVW6 561 aaPredicted RBP22.11■■□□□ 1.13
PSEN1-225ENST00000560005 APPL2Q8NEU8 664 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 ANKRD20A12PQ8NF67 263 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 GAB3Q8WWW8 586 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 PDLIM2Q96JY6 352 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 SMOC1Q9H4F8 434 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 NFE2L3Q9Y4A8 694 aa22.11■■□□□ 1.13
PSEN1-225ENST00000560005 FAM13AO94988 1023 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 KCNK5O95279 499 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 TPM3P06753 285 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 CDK11BP21127 795 aaKnown RBP22.1■■□□□ 1.13
PSEN1-225ENST00000560005 RAP1GAPP47736 663 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 SPAG1Q07617 926 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 STK4Q13043 487 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 STXBP4Q6ZWJ1 553 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 SYNPOQ8N3V7 929 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 ACAP3Q96P50 834 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 PGLYRP2Q96PD5 576 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 ACO2Q99798 780 aaKnown RBP22.1■■□□□ 1.13
PSEN1-225ENST00000560005 LSM14BQ9BX40 385 aaKnown RBP22.1■■□□□ 1.13
PSEN1-225ENST00000560005 PTPRHQ9HD43 1115 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 CNTN3Q9P232 1028 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 KCNG1Q9UIX4 513 aa22.1■■□□□ 1.13
PSEN1-225ENST00000560005 VNN2O95498 520 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 ARHGAP29Q52LW3 1261 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 PKN3Q6P5Z2 889 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 SMYD4Q8IYR2 804 aaPredicted RBP22.09■■□□□ 1.13
PSEN1-225ENST00000560005 BEST2Q8NFU1 509 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 KIFAP3Q92845 792 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 REEP2Q9BRK0 252 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 CRISPLD1Q9H336 500 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 SLC39A2Q9NP94 309 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 FANCLQ9NW38 375 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 PCDHB8Q9UN66 801 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 CTNND2Q9UQB3 1225 aa22.09■■□□□ 1.13
PSEN1-225ENST00000560005 PHLPP2Q6ZVD8 1323 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 CITO14578 2027 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 DPYSL4O14531 572 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 MEFVO15553 781 aaPredicted RBP22.08■■□□□ 1.13
PSEN1-225ENST00000560005 OR4Q2P0C623 313 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 TNK2Q07912 1038 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 PLD1Q13393 1074 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 PLA2G2CQ5R387 149 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 PSAPL1Q6NUJ1 521 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 HAUS6Q7Z4H7 955 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 MRFAP1L1Q96HT8 127 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 TSG101Q99816 390 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 MKNK1Q9BUB5 465 aa22.08■■□□□ 1.13
PSEN1-225ENST00000560005 TARS2Q9BW92 718 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms