RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TRAPPC3O43617 180 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 PAEPP09466 180 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 ODC1P11926 461 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 CYP11B1P15538 503 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 PTPN1P18031 435 aaKnown RBP9.99□□□□□ -0.81
HERC1-206ENST00000559996 ACAT1P24752 427 aaKnown RBP9.99□□□□□ -0.81
HERC1-206ENST00000559996 ERVFC1P60507 584 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 CCZ1BP86790 482 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
HERC1-206ENST00000559996 FMO1Q01740 532 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 PTK2Q05397 1052 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 PKDCCQ504Y2 493 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 SPOUT1Q5T280 376 aaKnown RBP9.99□□□□□ -0.81
HERC1-206ENST00000559996 OVOS1Q6IE37 1185 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 PRSS55Q6UWB4 352 aaPredicted RBP9.99□□□□□ -0.81
HERC1-206ENST00000559996 RAD9BQ6WBX8 426 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 ACOT1Q86TX2 421 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 PALB2Q86YC2 1186 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 CNGA4Q8IV77 575 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 ZNF830Q96NB3 372 aaPredicted RBP9.99□□□□□ -0.81
HERC1-206ENST00000559996 CLSTN3Q9BQT9 956 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 TTPALQ9BTX7 342 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 HERC2P3Q9BVR0 1158 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 PLVAPQ9BX97 442 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 NT5C1AQ9BXI3 368 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 ZBP1Q9H171 429 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 NUCKS1Q9H1E3 243 aaKnown RBP9.99□□□□□ -0.81
HERC1-206ENST00000559996 NKX2-4Q9H2Z4 354 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 ALG13Q9NP73 1137 aaKnown RBP9.99□□□□□ -0.81
HERC1-206ENST00000559996 TMEM30AQ9NV96 361 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 CHD7Q9P2D1 2997 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 PCDHB12Q9Y5F1 795 aa9.99□□□□□ -0.81
HERC1-206ENST00000559996 SF3B1O75533 1304 aaKnown RBP eCLIP9.99□□□□□ -0.81
HERC1-206ENST00000559996 CARNS1A5YM72 827 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 A8MXQ7 604 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 H3BNC9 293 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 O00370 1275 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 DDX3XO00571 662 aaKnown RBP eCLIP9.98□□□□□ -0.81
HERC1-206ENST00000559996 ZNF263O14978 683 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 GRM6O15303 877 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 SERPING1P05155 500 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 RB1P06400 928 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 MMEP08473 750 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 OR4Q2P0C623 313 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 VDRP11473 427 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 KRT5P13647 590 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 FERP16591 822 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 BRD2P25440 801 aaKnown RBP9.98□□□□□ -0.81
HERC1-206ENST00000559996 USP8P40818 1118 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 GSDMDP57764 484 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 YWHAEP62258 255 aaKnown RBP9.98□□□□□ -0.81
HERC1-206ENST00000559996 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
HERC1-206ENST00000559996 ARID5AQ03989 594 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 YWHAHQ04917 246 aaPredicted RBP9.98□□□□□ -0.81
HERC1-206ENST00000559996 ELAVL2Q12926 359 aaKnown RBP9.98□□□□□ -0.81
HERC1-206ENST00000559996 MTF1Q14872 753 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 CNGA2Q16280 664 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 ASIC2Q16515 512 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 USP41Q3LFD5 358 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 PPP1R26Q5T8A7 1209 aaPredicted RBP9.98□□□□□ -0.81
HERC1-206ENST00000559996 DMRTA1Q5VZB9 504 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 ARHGAP17Q68EM7 881 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 CEP57Q86XR8 500 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 GPR65Q8IYL9 337 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 VPS52Q8N1B4 723 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 TTC39CQ8N584 583 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 ZNF397Q8NF99 534 aaPredicted RBP9.98□□□□□ -0.81
HERC1-206ENST00000559996 AUTS2Q8WXX7 1259 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 PIK3R5Q8WYR1 880 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 TMEM169Q96HH4 297 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 TGS1Q96RS0 853 aaKnown RBP9.98□□□□□ -0.81
HERC1-206ENST00000559996 AGPAT1Q99943 283 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 B3GNT5Q9BYG0 378 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 ZCWPW1Q9H0M4 648 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 SNX25Q9H3E2 840 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 RXFP1Q9HBX9 757 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 AAASQ9NRG9 546 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 MTRRQ9UBK8 725 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 CYTH4Q9UIA0 394 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 GTF3C4Q9UKN8 822 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 DSEQ9UL01 958 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 CDH9Q9ULB4 789 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 LZTS1Q9Y250 596 aa9.98□□□□□ -0.81
HERC1-206ENST00000559996 SSU72P8A0A1W2PR75 194 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 SOWAHDA6NJG2 315 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 CLDN5O00501 218 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 LPXNO60711 386 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 BEST1O76090 585 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 LCA5LO95447 670 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 CYP1A1P04798 512 aaPredicted RBP9.97□□□□□ -0.81
HERC1-206ENST00000559996 CTSAP10619 480 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 UNGP13051 313 aaPredicted RBP9.97□□□□□ -0.81
HERC1-206ENST00000559996 RPL17P18621 184 aaKnown RBP9.97□□□□□ -0.81
HERC1-206ENST00000559996 GNA15P30679 374 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
HERC1-206ENST00000559996 CDH5P33151 784 aaPredicted RBP9.97□□□□□ -0.81
HERC1-206ENST00000559996 CTNNB1P35222 781 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 IRS1P35568 1242 aa9.97□□□□□ -0.81
HERC1-206ENST00000559996 PPM1AP35813 382 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms