RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 RAB6BQ9NRW1 208 aa14.39□□□□□ -0.11
CSPG4P12-202ENST00000559989 RABGEF1Q9UJ41 708 aa14.39□□□□□ -0.11
CSPG4P12-202ENST00000559989 DBR1Q9UK59 544 aaKnown RBP14.39□□□□□ -0.11
CSPG4P12-202ENST00000559989 MGAT4AQ9UM21 535 aa14.39□□□□□ -0.11
CSPG4P12-202ENST00000559989 SFI1A8K8P3 1242 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PTPN7P35236 360 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZRANB3Q5FWF4 1079 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PGBD2Q6P3X8 592 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 ILKAPQ9H0C8 392 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 NUP160Q12769 1436 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 USP19O94966 1318 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 SLC16A2P36021 539 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 IFNGR2P38484 337 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 ARHGAP22Q7Z5H3 698 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 CLYBLQ8N0X4 340 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 NMD3Q96D46 503 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 EYA1Q99502 592 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 SLC39A10Q9ULF5 831 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 KIF21AQ7Z4S6 1674 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 SMCO3A2RU48 225 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 VCLP18206 1134 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 GRK4P32298 578 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 ARF3P61204 181 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 ARF1P84077 181 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 OASLQ15646 514 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 OLFML1Q6UWY5 402 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 LINC00523Q86TU6 105 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZNF614Q8N883 585 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 USP13Q92995 863 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 RNPC3Q96LT9 517 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 TMEM79Q9BSE2 394 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 MOV10L1Q9BXT6 1211 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 DSN1Q9H410 356 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 SLC40A1Q9NP59 571 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PCDHGA3Q9Y5H0 932 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZNF804BA4D1E1 1349 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PPEF1O14829 653 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PSMB9P28065 219 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PPP2R1BP30154 601 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 TWF1Q12792 350 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 C3orf62Q6ZUJ4 267 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 EFCAB1Q9HAE3 211 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 NEK6Q9HC98 313 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 CCDC189A1A4V9 331 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 CCDC182A6NF36 153 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 TIMM44O43615 452 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 ECE2O60344 883 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 GRK3P35626 688 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 IL5RAQ01344 420 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 UBE2SQ16763 222 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 DUOXA2Q1HG44 320 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 E2F7Q96AV8 911 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 RACGAP1Q9H0H5 632 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 DUSP12Q9UNI6 340 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 RAD23AP54725 363 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PCSK7Q16549 785 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 EIF2S3LQ2VIR3 472 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 SUGP1Q8IWZ8 645 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 RBBP8NLQ8NC74 664 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 C1orf50Q9BV19 199 aa14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 INTS2Q9H0H0 1204 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 TRMT6Q9UJA5 497 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-202ENST00000559989 PLXNC1O60486 1568 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 TRAF2Q12933 501 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 OLFML2AQ68BL7 652 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 GOLPH3Q9H4A6 298 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 BTBD3Q9Y2F9 522 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 LEMD3Q9Y2U8 911 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 ERVK-10P10266 1014 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 RFX3P48380 749 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 CAMK2GQ13555 558 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 DDI2Q5TDH0 399 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 CAMK1DQ8IU85 385 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 SCFD2Q8WU76 684 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 PPP2R3CQ969Q6 453 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 KCTD14Q9BQ13 255 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 OXCT2Q9BYC2 517 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 XDHP47989 1333 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 A0A0X1KG70 313 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 SCUBE1Q8IWY4 988 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 WDR60Q8WVS4 1066 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 CNKSR1Q969H4 720 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 NRDE2Q9H7Z3 1164 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 NOD2Q9HC29 1040 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 YEATS2Q9ULM3 1422 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 NCK2O43639 380 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 SSNA1O43805 119 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 AKR1D1P51857 326 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 SCARA3Q6AZY7 606 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 PAK5Q9P286 719 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 A1BGP04217 495 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 SFSWAPQ12872 951 aaKnown RBP14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 ITIH4Q14624 930 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 PIGOQ8TEQ8 1089 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 ING4Q9UNL4 249 aa14.37□□□□□ -0.11
CSPG4P12-202ENST00000559989 POLR1DQ9Y2S0 133 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms