RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 FREM2Q5SZK8 3169 aa16.9■□□□□ 0.3
AC243562.3-201ENST00000559866 LOC400499M0QZD8 3231 aa16.9■□□□□ 0.3
AC243562.3-201ENST00000559866 PLXND1Q9Y4D7 1925 aa16.9■□□□□ 0.3
AC243562.3-201ENST00000559866 DSPP15924 2871 aaKnown RBP16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 CYP11A1P05108 521 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 NFICP08651 508 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 HAPLN1P10915 354 aaPredicted RBP16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 CSRP1P21291 193 aaKnown RBP16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 DRD1P21728 446 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 DGKEP52429 567 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 IRX4P78413 519 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 VEPH1Q14D04 833 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 KARSQ15046 597 aaKnown RBP16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 PTPAQ15257 358 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 SDHAF4Q5VUM1 108 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 C9orf57Q5W0N0 161 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 ARMCX5Q6P1M9 558 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 LRSAM1Q6UWE0 723 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 SPIRE2Q8WWL2 714 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 GCNAQ96QF7 691 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 SLC22A12Q96S37 553 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 TIPINQ9BVW5 301 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 C17orf75Q9HAS0 396 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 TDP1Q9NUW8 608 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 KCNG1Q9UIX4 513 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 KLK13Q9UKR3 277 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 LHX6Q9UPM6 363 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 ADAMTS20P59510 1910 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 LAMA5O15230 3695 aa16.89■□□□□ 0.29
AC243562.3-201ENST00000559866 CEP192Q8TEP8 1941 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 TMEM8BA6NDV4 472 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 LAD1O00515 517 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 PIRO00625 290 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 ADRB2P07550 413 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 CEACAM1P13688 526 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 PLS3P13797 630 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 HNRNPLP14866 589 aaKnown RBP eCLIP16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 GUCY2CP25092 1073 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 AVPR1AP37288 418 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 TOB1P50616 345 aaPredicted RBP16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 BFSP1Q12934 665 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 UAP1L1Q3KQV9 507 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 ZSCAN31Q96LW9 406 aaPredicted RBP16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 PNMA5Q96PV4 448 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 ABI2Q9NYB9 513 aaPredicted RBP16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 PCDHB6Q9Y5E3 794 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 WNT6Q9Y6F9 365 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 PCDH15Q96QU1 1955 aa16.88■□□□□ 0.29
AC243562.3-201ENST00000559866 ANO9A1A5B4 782 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 KHNYNO15037 678 aaKnown RBP16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 TUFMP49411 452 aaKnown RBP16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 NCKAP1LP55160 1127 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 PSMD2Q13200 908 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 MTF1Q14872 753 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 ZNF77Q15935 545 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 CCDC142Q17RM4 750 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 SLC39A4Q6P5W5 647 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 FRMD1Q8N878 549 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 CD101Q93033 1021 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 FAM212AQ96EL1 285 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 ECT2Q9H8V3 914 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 PPP4R2Q9NY27 417 aa16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.87■□□□□ 0.29
AC243562.3-201ENST00000559866 ASCC3Q8N3C0 2202 aaKnown RBP16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 SPAARA0A1B0GVQ0 90 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 TAF4O00268 1085 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 SMTNP53814 917 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 SEC13P55735 322 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 USP4Q13107 963 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 FBXO43Q4G163 708 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 ANO7Q6IWH7 933 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 DTHD1Q6ZMT9 781 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 CYP2U1Q7Z449 544 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 RASSF3Q86WH2 238 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 SFTPA1Q8IWL2 248 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 TTC16Q8NEE8 873 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 MDGA1Q8NFP4 955 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 BICD1Q96G01 975 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 CYP2S1Q96SQ9 504 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 PLIN2Q99541 437 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 KIF9Q9HAQ2 790 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 FSCN3Q9NQT6 498 aa16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 CPSF3Q9UKF6 684 aaKnown RBP16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 MAGED2Q9UNF1 606 aaPredicted RBP16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 ATXN2Q99700 1313 aaKnown RBP16.86■□□□□ 0.29
AC243562.3-201ENST00000559866 TISP43B9A030 160 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 OGTO15294 1046 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 CHRM1P11229 460 aaPredicted RBP16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 PDGFRLQ15198 375 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 TAF12Q16514 161 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 GAB4Q2WGN9 574 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 EML3Q32P44 896 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 ZC2HC1CQ53FD0 456 aaPredicted RBP16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 ARSHQ5FYA8 562 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 WSCD1Q658N2 575 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 SCARA3Q6AZY7 606 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 CC2D1AQ6P1N0 951 aaPredicted RBP16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 MON1AQ86VX9 555 aa16.85■□□□□ 0.29
AC243562.3-201ENST00000559866 CPA6Q8N4T0 437 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms