RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 LPPQ93052 612 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 CPXM1Q96SM3 734 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 ADAM2Q99965 735 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
USP3-213ENST00000559711 ARFGAP3Q9NP61 516 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 UBN1Q9NPG3 1134 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
USP3-213ENST00000559711 DMGDHQ9UI17 866 aaKnown RBP13.43□□□□□ -0.26
USP3-213ENST00000559711 TSPAN16Q9UKR8 245 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 L1RE1Q9UN81 338 aa13.43□□□□□ -0.26
USP3-213ENST00000559711 KBTBD13C9JR72 458 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 HUS1O60921 280 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 ERLIN1O75477 346 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 GJB6O95452 261 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 PFKMP08237 780 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 PYGMP11217 842 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 WARSP23381 471 aaKnown RBP13.42□□□□□ -0.26
USP3-213ENST00000559711 RPL9P32969 192 aaKnown RBP13.42□□□□□ -0.26
USP3-213ENST00000559711 AFF1P51825 1210 aaKnown RBP13.42□□□□□ -0.26
USP3-213ENST00000559711 PDCLQ13371 301 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 ZNF211Q13398 564 aaPredicted RBP13.42□□□□□ -0.26
USP3-213ENST00000559711 LONRF2Q1L5Z9 754 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 PPP1R26Q5T8A7 1209 aaPredicted RBP13.42□□□□□ -0.26
USP3-213ENST00000559711 CYP4A22Q5TCH4 519 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 C8orf74Q6P047 294 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 ACOT1Q86TX2 421 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 XYLT1Q86Y38 959 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 APPL2Q8NEU8 664 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 SH3TC2Q8TF17 1288 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 PGBD4Q96DM1 585 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 KRT12Q99456 494 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 AP1M1Q9BXS5 423 aa13.42□□□□□ -0.26
USP3-213ENST00000559711 A8MXQ7 604 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 DNM1LO00429 736 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 ATP8B1O43520 1251 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 PSTPIP1O43586 416 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 ERBB2P04626 1255 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 SETSIPP0DME0 302 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 HSPA6P17066 643 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 PSMC1P62191 440 aaKnown RBP13.41□□□□□ -0.26
USP3-213ENST00000559711 MBTPS1Q14703 1052 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 PPP2R5EQ16537 467 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 BEND6Q5SZJ8 279 aaPredicted RBP13.41□□□□□ -0.26
USP3-213ENST00000559711 DCUN1D2Q6PH85 259 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 CCNI2Q6ZMN8 369 aaPredicted RBP13.41□□□□□ -0.26
USP3-213ENST00000559711 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
USP3-213ENST00000559711 NIPA2Q8N8Q9 360 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 UBA3Q8TBC4 463 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 FNIP1Q8TF40 1166 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 STK32AQ8WU08 396 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 DDX27Q96GQ7 796 aaKnown RBP13.41□□□□□ -0.26
USP3-213ENST00000559711 MCEEQ96PE7 176 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 DNAI2Q9GZS0 605 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 MIS12Q9H081 205 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 UNC93B1Q9H1C4 597 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 SNX25Q9H3E2 840 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 RSAD1Q9HA92 442 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 PAK6Q9NQU5 681 aaPredicted RBP13.41□□□□□ -0.26
USP3-213ENST00000559711 STIM2Q9P246 746 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 TJP2Q9UDY2 1190 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 PTPN22Q9Y2R2 807 aa13.41□□□□□ -0.26
USP3-213ENST00000559711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP3-213ENST00000559711 GABRDO14764 452 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 INPPL1O15357 1258 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SART1O43290 800 aaKnown RBP13.4□□□□□ -0.26
USP3-213ENST00000559711 CAPN15O75808 1086 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 KRT3P12035 628 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 LMO2P25791 158 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SCNN1GP51170 649 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 ZNF252P-AS1Q0IIN9 211 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 PIGHQ14442 188 aaPredicted RBP13.4□□□□□ -0.26
USP3-213ENST00000559711 GOLGA7BQ2TAP0 167 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SEL1L2Q5TEA6 688 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 AADACL2Q6P093 401 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 TTC30AQ86WT1 665 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 ECHDC2Q86YB7 292 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 RHOT1Q8IXI2 618 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 ADGRF2Q8IZF7 708 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SLC35F5Q8WV83 523 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 PLVAPQ9BX97 442 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SLITRK6Q9H5Y7 841 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 RGS18Q9NS28 235 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 NR2E1Q9Y466 385 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SCN1AP35498 2009 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 PODXLO00592 558 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 CYB561D2O14569 222 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SEC31AO94979 1220 aaKnown RBP13.4□□□□□ -0.26
USP3-213ENST00000559711 PDGFRBP09619 1106 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 IGFBP6P24592 240 aaPredicted RBP13.4□□□□□ -0.26
USP3-213ENST00000559711 TNFRSF8P28908 595 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 RFC1P35251 1148 aaPredicted RBP13.4□□□□□ -0.26
USP3-213ENST00000559711 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP3-213ENST00000559711 TAS2R40P59535 323 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 FAM189BP81408 668 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 SLC7A5Q01650 507 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 OGDHQ02218 1023 aa13.4□□□□□ -0.26
USP3-213ENST00000559711 LRRC38Q5VT99 294 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms