RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	LRRC63	Q05C16	580 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	TYRO3	Q06418	890 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ELAVL2	Q12926	359 aa	Known RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	MYO1E	Q12965	1108 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	RAB33A	Q14088	237 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	LEXM	Q3ZCV2	418 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	MDH1B	Q5I0G3	518 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	INTS8	Q75QN2	995 aa	Known RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	FANCL	Q9NW38	375 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	DNMT3B	Q9UBC3	853 aa	Known RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	FBXW11	Q9UKB1	542 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZDBF2	Q9HCK1	2354 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	KIAA0391	O15091	583 aa	Known RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	AP5Z1	O43299	807 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	BEST1	O76090	585 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ABLIM3	O94929	683 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ATP1A3	P13637	1013 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	TNNT1	P13805	278 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ATF2	P15336	505 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ATF6	P18850	670 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	BDNF	P23560	247 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	TNNC1	P63316	161 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	NOP14	P78316	857 aa	Known RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	KCNH2	Q12809	1159 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	TPD52L1	Q16890	204 aa	Predicted RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	PPM1L	Q5SGD2	360 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	PDE12	Q6L8Q7	609 aa	Known RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ARHGEF19	Q8IW93	802 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZNF560	Q96MR9	790 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	KCNK16	Q96T55	309 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	UHRF1	Q96T88	793 aa	Predicted RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	SMG9	Q9H0W8	520 aa	Known RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	FNIP2	Q9P278	1114 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	RWDD2A	Q9UIY3	292 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	NFE2L3	Q9Y4A8	694 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573		A8MXQ7	604 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	C2CD4D	B7Z1M9	353 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	SCAMP3	O14828	347 aa	Known RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	SLC9A1	P19634	815 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	GNL1	P36915	607 aa	Predicted RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	FMO5	P49326	533 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	NDST1	P52848	882 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	SNRPF	P62306	86 aa	Known RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	COBLL1	Q53SF7	1204 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZNF667	Q5HYK9	610 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	SCN4B	Q8IWT1	228 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	AOPEP	Q8N6M6	819 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	LRRC52	Q8N7C0	313 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	TMC2	Q8TDI7	906 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	CASP10	Q92851	521 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	PCED1B	Q96HM7	432 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZSWIM3	Q96MP5	696 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	RAB20	Q9NX57	234 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	TAB2	Q9NYJ8	693 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	LIMD1	Q9UGP4	676 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	COG5	Q9UP83	839 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ERICH4	A6NGS2	130 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ASS1	P00966	412 aa	Known RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ELF1	P32519	619 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	TJAP1	Q5JTD0	557 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	LIN9	Q5TKA1	542 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	KRT39	Q6A163	491 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	TMEM184A	Q6ZMB5	413 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	RBM43	Q6ZSC3	357 aa	Known RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	METTL23	Q86XA0	190 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	MYADM	Q96S97	322 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZNF518B	Q9C0D4	1074 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZCWPW1	Q9H0M4	648 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	VPS16	Q9H269	839 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	TMEM8A	Q9HCN3	771 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	GDAP2	Q9NXN4	497 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	MUTYH	Q9UIF7	546 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	INSL5	Q9Y5Q6	135 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	BACE2	Q9Y5Z0	518 aa		10.8	□□□□□ -0.68
FAM227B-208	ENST00000559573	PIK3R2	O00459	728 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZMYND10	O75800	440 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	CYP11A1	P05108	521 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	MYL4	P12829	197 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	PGF	P49763	221 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	HNRNPH2	P55795	449 aa	Known RBP	10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	SMAD2	Q15796	467 aa	Known RBP	10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	NFIL3	Q16649	462 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	IER5L	Q5T953	404 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	CES5A	Q6NT32	575 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	FILIP1	Q7Z7B0	1213 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	NT5DC4	Q86YG4	428 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	TRIM59	Q8IWR1	403 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	TRIML1	Q8N9V2	468 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	MLKL	Q8NB16	471 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	MYLPF	Q96A32	169 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	MCRS1	Q96EZ8	462 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	CDCA3	Q99618	268 aa	Predicted RBP	10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	SYT15	Q9BQS2	421 aa		10.79	□□□□□ -0.68
FAM227B-208	ENST00000559573	HSD3B7	Q9H2F3	369 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms