RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MAN2A1Q16706 1144 aa21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 TCP11X2Q5H9J9 407 aa21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 CYP26C1Q6V0L0 522 aa21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 TUBGCP2Q9BSJ2 902 aa21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 PCDHB5Q9Y5E4 795 aa21.66■■□□□ 1.06
TSPAN3-207ENST00000559494 NCOR1O75376 2440 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 NDST1P52848 882 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 CETN1Q12798 172 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 CBX2Q14781 532 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 NFE2Q16621 373 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 TJAP1Q5JTD0 557 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 MIIPQ5JXC2 388 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 SPPL2BQ8TCT7 592 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 C2orf15Q8WU43 125 aaKnown RBP21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 RIPOR3Q96MK2 946 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 HSD3B7Q9H2F3 369 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 ABI2Q9NYB9 513 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 HSFX1Q9UBD0 423 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 HMGXB4Q9UGU5 601 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 FAM50BQ9Y247 325 aa21.65■■□□□ 1.06
TSPAN3-207ENST00000559494 SOAT2O75908 522 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 POU2F2P09086 479 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 HAPLN1P10915 354 aaPredicted RBP21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 EEF1GP26641 437 aaKnown RBP21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 INCA1Q0VD86 236 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 TWF1Q12792 350 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 VWA3BQ502W6 1294 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 UNC93AQ86WB7 457 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 AOPEPQ8N6M6 819 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 MYCBPAPQ8TBZ2 947 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 WHAMMQ8TF30 809 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 ARID3AQ99856 593 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 BPIFA3Q9BQP9 254 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 CRACR2AQ9BSW2 395 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 NAT10Q9H0A0 1025 aaKnown RBP21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 POMKQ9H5K3 350 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 PIDD1Q9HB75 910 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 YIPF1Q9Y548 306 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 NOTCH4Q99466 2003 aa21.64■■□□□ 1.05
TSPAN3-207ENST00000559494 LRG1P02750 347 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 PRKCSHP14314 528 aaPredicted RBP21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 CD58P19256 250 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 CYP2F1P24903 491 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 ZNF165P49910 485 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 ORC1Q13415 861 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 MDH1BQ5I0G3 518 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 GRASPQ7Z6J2 395 aaPredicted RBP21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 CRYBG2Q8N1P7 616 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 B3GALNT2Q8NCR0 500 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 MYLPFQ96A32 169 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 NECTIN4Q96NY8 510 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 NT5C1BQ96P26 610 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 TWNKQ96RR1 684 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 INTS2Q9H0H0 1204 aaKnown RBP21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 NDST4Q9H3R1 872 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 HCFC1R1Q9NWW0 138 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 CEP72Q9P209 647 aa21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 DNMT3BQ9UBC3 853 aaKnown RBP21.63■■□□□ 1.05
TSPAN3-207ENST00000559494 XYLBO75191 536 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 CILPO75339 1184 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 TUFMP49411 452 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 NTHL1P78549 312 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 CUL2Q13617 745 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 MAPRE1Q15691 268 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 MGAT5BQ3V5L5 792 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 ACOT1Q86TX2 421 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 SPATA2LQ8IUW3 424 aaPredicted RBP21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 DHX40Q8IX18 779 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 PCED1BQ96HM7 432 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 SEPT5Q99719 369 aaPredicted RBP21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 PHF7Q9BWX1 381 aaPredicted RBP21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 ELOVL4Q9GZR5 314 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 WDR6Q9NNW5 1121 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 CISHQ9NSE2 258 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 TAB2Q9NYJ8 693 aa21.62■■□□□ 1.05
TSPAN3-207ENST00000559494 TTC28Q96AY4 2481 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 ZNF18P17022 549 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 SLC9A1P19634 815 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 ALDH1A3P47895 512 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 IQCB1Q15051 598 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 KRT31Q15323 416 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 CFAP221Q4G0U5 840 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 PHLDB3Q6NSJ2 640 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 GBP6Q6ZN66 633 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 ARHGEF19Q8IW93 802 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 KAT5Q92993 513 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 FUBP3Q96I24 572 aaKnown RBP eCLIP21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 TNIP3Q96KP6 325 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 B3GNT5Q9BYG0 378 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 ABCB6Q9NP58 842 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 GCNT4Q9P109 453 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 VCANP13611 3396 aa21.61■■□□□ 1.05
TSPAN3-207ENST00000559494 GTPBP10A4D1E9 387 aaKnown RBP21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 PTPN2P17706 415 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 ATF6P18850 670 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 BDNFP23560 247 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 GPR15P49685 360 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 CYP27A1Q02318 531 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 EXOC3L4Q17RC7 722 aa21.6■■□□□ 1.05
TSPAN3-207ENST00000559494 C4orf50Q6ZRC1 276 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms