RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 WNT16Q9UBV4 365 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 SIX4Q9UIU6 781 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 ZMYM5Q9UJ78 669 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 GTF3C4Q9UKN8 822 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 L1RE1Q9UN81 338 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 DUSP12Q9UNI6 340 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 NUMBLQ9Y6R0 609 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 PTPRJQ12913 1337 aa4.68□□□□□ -1.66
SNX1-205ENST00000559339 CITO14578 2027 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 A0A1W2PRU2 124 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 ANHXE9PGG2 379 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 DPYSL4O14531 572 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 TRIM66O15016 1216 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 SLC16A3O15427 465 aaKnown RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 ECI2O75521 394 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 GNA14O95837 355 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 C4BPAP04003 597 aaKnown RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 CFHP08603 1231 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 PDGFRBP09619 1106 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 HAPLN1P10915 354 aaPredicted RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 COL9A1P20849 921 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 WARSP23381 471 aaKnown RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 ACAT1P24752 427 aaKnown RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 ANXA13P27216 316 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 GABRR2P28476 465 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 AVPR1AP37288 418 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 GRIK1P39086 918 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 PIK3CAP42336 1068 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 GCLMP48507 274 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 CASP4P49662 377 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 PDE6CP51160 858 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 EPHA5P54756 1037 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 DLG4P78352 724 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 CYP27A1Q02318 531 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 HTR4Q13639 388 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 DCAF17Q5H9S7 520 aaPredicted RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 WDR44Q5JSH3 913 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 TCERG1LQ5VWI1 586 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 TDRD10Q5VZ19 366 aaKnown RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 KRT39Q6A163 491 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 ISM2Q6H9L7 571 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 KLHL10Q6JEL2 608 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 PARM1Q6UWI2 310 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 VSTM1Q6UX27 236 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 HFE2Q6ZVN8 426 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 SV2AQ7L0J3 742 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 LRRTM3Q86VH5 581 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 NPAS3Q8IXF0 933 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 ADSSL1Q8N142 457 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 FBXL6Q8N531 539 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 TTC39CQ8N584 583 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 TRIML1Q8N9V2 468 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 ZSCAN18Q8TBC5 510 aaPredicted RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 FEZF2Q8TBJ5 459 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 MYCBPAPQ8TBZ2 947 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 RSAD2Q8WXG1 361 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 ZNF516Q92618 1163 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 ERCC4Q92889 916 aaPredicted RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 FGF14Q92915 247 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 ELSPBP1Q96BH3 223 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 MCRS1Q96EZ8 462 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 EEF2KMTQ96G04 330 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 FAXDC2Q96IV6 333 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 TMEM209Q96SK2 561 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 RTP3Q9BQQ7 232 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 SYT15Q9BQS2 421 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 PI4K2AQ9BTU6 479 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 TRMT61BQ9BVS5 477 aaKnown RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 KCNH6Q9H252 994 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 MMRN2Q9H8L6 949 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 VRTNQ9H8Y1 702 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 METTL14Q9HCE5 456 aaKnown RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 TMEM8AQ9HCN3 771 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 C11orf16Q9NQ32 467 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 ARMCX3Q9UH62 379 aaPredicted RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 MAGED2Q9UNF1 606 aaPredicted RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 ARIH1Q9Y4X5 557 aaPredicted RBP4.67□□□□□ -1.66
SNX1-205ENST00000559339 ATP8B3O60423 1300 aa4.67□□□□□ -1.66
SNX1-205ENST00000559339 MYBPHLA2RUH7 354 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SOBPA7XYQ1 873 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 BIN1O00499 593 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 ZNF263O14978 683 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 NCAM2O15394 837 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 SOAT2O75908 522 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 ASS1P00966 412 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 CEBPBP17676 345 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 PSMC3P17980 439 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 PTPN1P18031 435 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 ATF6P18850 670 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CCNE1P24864 410 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CYP2F1P24903 491 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 LMO2P25791 158 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 DDX6P26196 483 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNX1-205ENST00000559339 MAGEA11P43364 429 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 PPP3CCP48454 512 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 MXI1P50539 228 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CLCN5P51795 746 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CDR1P51861 262 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SLC8A3P57103 927 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms