RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 ASIC3Q9UHC3 531 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 SLC12A6Q9UHW9 1150 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 CPA4Q9UI42 421 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 BARX2Q9UMQ3 279 aaPredicted RBP16.83■□□□□ 0.28
USP8-208ENST00000559329 DERAQ9Y315 318 aa16.83■□□□□ 0.28
USP8-208ENST00000559329 SMIM35A0A1B0GVV1 85 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 PI4K2BG5E9Z4 385 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 DYNC1LI2O43237 492 aaPredicted RBP16.82■□□□□ 0.28
USP8-208ENST00000559329 RIPK2O43353 540 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 KRT3P12035 628 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 CETN2P41208 172 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 GPD2P43304 727 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 CDC42EP1Q00587 391 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 SLC25A11Q02978 314 aaKnown RBP16.82■□□□□ 0.28
USP8-208ENST00000559329 SLC29A2Q14542 456 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 ZNF268Q14587 947 aaPredicted RBP16.82■□□□□ 0.28
USP8-208ENST00000559329 CST9Q5W186 159 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 TTC39CQ8N584 583 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 ARFGAP1Q8N6T3 406 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 MCRS1Q96EZ8 462 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
USP8-208ENST00000559329 CXCL16Q9H2A7 254 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 FLRT1Q9NZU1 646 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 hCG_1818297A0A087WSY0 165 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 C3orf70A6NLC5 250 aaPredicted RBP16.82■□□□□ 0.28
USP8-208ENST00000559329 LIASO43766 372 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 NPTXRO95502 500 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 ZNF865P0CJ78 1059 aaPredicted RBP16.82■□□□□ 0.28
USP8-208ENST00000559329 KRT10P13645 584 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 PSMC1P62191 440 aaKnown RBP16.82■□□□□ 0.28
USP8-208ENST00000559329 ADAM17P78536 824 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 IFFO1Q0D2I5 559 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 PCBP1Q15365 356 aaKnown RBP eCLIP16.82■□□□□ 0.28
USP8-208ENST00000559329 PRAMEF19Q5SWL8 479 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 SLC27A1Q6PCB7 646 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 HOOK3Q86VS8 718 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 ARFGAP2Q8N6H7 521 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 RAPGEF5Q92565 580 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 KIF12Q96FN5 646 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 SNX27Q96L92 541 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 CENPHQ9H3R5 247 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 CDHR5Q9HBB8 845 aa16.82■□□□□ 0.28
USP8-208ENST00000559329 DCDC2CA8MYV0 355 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 GOLGA8SH3BPF8 625 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 LRCH4O75427 683 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 TJP3O95049 919 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 CYP3A5P20815 502 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 KLRC2P26717 231 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 MDH1P40925 334 aaKnown RBP16.81■□□□□ 0.28
USP8-208ENST00000559329 CDKN2BP42772 138 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 NDST1P52848 882 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 CAV1Q03135 178 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 HIC1Q14526 733 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 ZBTB6Q15916 424 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 OLFML2BQ68BL8 750 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 TTC19Q6DKK2 380 aaPredicted RBP16.81■□□□□ 0.28
USP8-208ENST00000559329 TRMT10CQ7L0Y3 403 aaKnown RBP16.81■□□□□ 0.28
USP8-208ENST00000559329 USP6NLQ92738 828 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 PGM2Q96G03 612 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 CCDC114Q96M63 670 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 ZMAT2Q96NC0 199 aaKnown RBP16.81■□□□□ 0.28
USP8-208ENST00000559329 FAM118BQ9BPY3 351 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 FAM49AQ9H0Q0 323 aaPredicted RBP16.81■□□□□ 0.28
USP8-208ENST00000559329 CWC15Q9P013 229 aaKnown RBP16.81■□□□□ 0.28
USP8-208ENST00000559329 DOCK3Q8IZD9 2030 aa16.81■□□□□ 0.28
USP8-208ENST00000559329 M0QYV0 167 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 HAS3O00219 553 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 IGF2BP3O00425 579 aaKnown RBP eCLIP16.8■□□□□ 0.28
USP8-208ENST00000559329 IGHA2P01877 340 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 ATF2P15336 505 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 PSMA2P25787 234 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 ITGA8P53708 1063 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 GUCY1A3Q02108 690 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 TMEM62Q0P6H9 643 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 TAZQ16635 292 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 LCLAT1Q6UWP7 414 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 APBB1IPQ7Z5R6 666 aaPredicted RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 TLK2Q86UE8 772 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 TRAIPQ9BWF2 469 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 EIF2AQ9BY44 585 aaKnown RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 KIAA1257Q9ULG3 409 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 NOVA2Q9UNW9 492 aaKnown RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 TRIP11Q15643 1979 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 SRRM3A6NNA2 597 aaPredicted RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 CAND2O75155 1236 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 HPDP32754 393 aaPredicted RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 LSP1P33241 339 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 CHKAP35790 457 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 MFSD10Q14728 455 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 TRIP13Q15645 432 aaPredicted RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 TFDP3Q5H9I0 405 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 ALKAL1Q6UXT8 129 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 CATSPER4Q7RTX7 472 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 CCDC89Q8N998 374 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 HEXIM2Q96MH2 286 aaKnown RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 TSPYL1Q9H0U9 437 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 CDC42EP4Q9H3Q1 356 aaKnown RBP16.8■□□□□ 0.28
USP8-208ENST00000559329 RRAGCQ9HB90 399 aa16.8■□□□□ 0.28
USP8-208ENST00000559329 METTL5Q9NRN9 209 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms