RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
PCAT29-203ENST00000559212 MRPS31Q92665 395 aaKnown RBP11.39□□□□□ -0.59
PCAT29-203ENST00000559212 PI4K2AQ9BTU6 479 aa11.39□□□□□ -0.59
PCAT29-203ENST00000559212 KIF9Q9HAQ2 790 aa11.39□□□□□ -0.59
PCAT29-203ENST00000559212 PARD6AQ9NPB6 346 aa11.39□□□□□ -0.59
PCAT29-203ENST00000559212 OLFML3Q9NRN5 406 aa11.39□□□□□ -0.59
PCAT29-203ENST00000559212 GKN1Q9NS71 199 aa11.39□□□□□ -0.59
PCAT29-203ENST00000559212 TMLHEQ9NVH6 421 aa11.39□□□□□ -0.59
PCAT29-203ENST00000559212 ITGA11Q9UKX5 1188 aa11.39□□□□□ -0.59
PCAT29-203ENST00000559212 L1RE1Q9UN81 338 aa11.39□□□□□ -0.59
PCAT29-203ENST00000559212 MAGED2Q9UNF1 606 aaPredicted RBP11.39□□□□□ -0.59
PCAT29-203ENST00000559212 OTOGLQ3ZCN5 2332 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 OBSL1O75147 1896 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 GOLGA8IPA6NC78 632 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 GOLGA8JA6NMD2 632 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 HRO43593 1189 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 EXTL3O43909 919 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 LRP3O75074 770 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 F11P03951 625 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 KRT19P08727 400 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 TMEM191BP0C7N4 346 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 HMGA1P17096 107 aaKnown RBP11.38□□□□□ -0.59
PCAT29-203ENST00000559212 SYT1P21579 422 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 GPR15P49685 360 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 CASP5P51878 434 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 RPL10AP62906 217 aaKnown RBP11.38□□□□□ -0.59
PCAT29-203ENST00000559212 RUNX3Q13761 415 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 CCINQ13939 588 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 TMEM150AQ86TG1 271 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 TMEM86AQ8N2M4 240 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 CSGALNACT2Q8N6G5 542 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 LEO1Q8WVC0 666 aaPredicted RBP11.38□□□□□ -0.59
PCAT29-203ENST00000559212 USP13Q92995 863 aaPredicted RBP11.38□□□□□ -0.59
PCAT29-203ENST00000559212 ACBD6Q9BR61 282 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 RTKNQ9BST9 563 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 PCIF1Q9H4Z3 704 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 TMEM206Q9H813 350 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 TDP1Q9NUW8 608 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 PANK4Q9NVE7 773 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 DDX43Q9NXZ2 648 aaKnown RBP11.38□□□□□ -0.59
PCAT29-203ENST00000559212 UXTQ9UBK9 157 aaPredicted RBP11.38□□□□□ -0.59
PCAT29-203ENST00000559212 ZNF292O60281 2723 aa11.38□□□□□ -0.59
PCAT29-203ENST00000559212 EP300Q09472 2414 aaPredicted RBP11.38□□□□□ -0.59
PCAT29-203ENST00000559212 ZNF638Q14966 1978 aaKnown RBP11.37□□□□□ -0.59
PCAT29-203ENST00000559212 FRMD3A2A2Y4 597 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 SOBPA7XYQ1 873 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 ACAT1P24752 427 aaKnown RBP11.37□□□□□ -0.59
PCAT29-203ENST00000559212 CYP2F1P24903 491 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 RBP5P82980 135 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 AMPD2Q01433 879 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 GRSF1Q12849 480 aaKnown RBP eCLIP11.37□□□□□ -0.59
PCAT29-203ENST00000559212 SRSF5Q13243 272 aaKnown RBP11.37□□□□□ -0.59
PCAT29-203ENST00000559212 DDR2Q16832 855 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 INTS6LQ5JSJ4 861 aaKnown RBP11.37□□□□□ -0.59
PCAT29-203ENST00000559212 SDHAF4Q5VUM1 108 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 TXNDC8Q6A555 127 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 TRIM68Q6AZZ1 485 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 CC2D1AQ6P1N0 951 aaPredicted RBP11.37□□□□□ -0.59
PCAT29-203ENST00000559212 CEP68Q76N32 757 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 MON1AQ86VX9 555 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 WDR5BQ86VZ2 330 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 CCDC65Q8IXS2 484 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 GPD1LQ8N335 351 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 STKLD1Q8NE28 680 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 SPATA18Q8TC71 538 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 ANKRD36BP1Q96IX9 119 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 FAM83CQ9BQN1 747 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 CBWD1Q9BRT8 395 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 FGFBP2Q9BYJ0 223 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 EBF3Q9H4W6 596 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 PDE11AQ9HCR9 933 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 ABCB6Q9NP58 842 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 HPS4Q9NQG7 708 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 SEMA4GQ9NTN9 838 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 C2orf42Q9NWW7 574 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 GDAP2Q9NXN4 497 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 GTF3C4Q9UKN8 822 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 R3HCC1Q9Y3T6 440 aaKnown RBP11.37□□□□□ -0.59
PCAT29-203ENST00000559212 SNX9Q9Y5X1 595 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.37□□□□□ -0.59
PCAT29-203ENST00000559212 DMXL1Q9Y485 3027 aa11.37□□□□□ -0.59
PCAT29-203ENST00000559212 KIAA0391O15091 583 aaKnown RBP11.36□□□□□ -0.59
PCAT29-203ENST00000559212 ATG13O75143 517 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 NOL4O94818 638 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 PRPF6O94906 941 aaKnown RBP11.36□□□□□ -0.59
PCAT29-203ENST00000559212 PCSK1P29120 753 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 HOXA6P31267 233 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 LHX1P48742 406 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 MYO1EQ12965 1108 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 ZNF268Q14587 947 aaPredicted RBP11.36□□□□□ -0.59
PCAT29-203ENST00000559212 SLC39A14Q15043 492 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 TMEM196Q5HYL7 178 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 STXBP4Q6ZWJ1 553 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 OSTM1Q86WC4 334 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 SPATA2LQ8IUW3 424 aaPredicted RBP11.36□□□□□ -0.59
PCAT29-203ENST00000559212 ADGRF2Q8IZF7 708 aa11.36□□□□□ -0.59
PCAT29-203ENST00000559212 TOP6BLQ8N6T0 577 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms